RNA id: CI01000034_04282490_04284734.mRNA



Basic Information


Item Value
RNA id CI01000034_04282490_04284734.mRNA
length 1485
RNA type mRNA
GC content 0.42
exon number 3
gene id CI01000034_04282490_04284734
representative True

Chromosome Information


Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4282490 ~ 4285536 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTTGAGACTGGTGCTGCTGGGCTCAGCGGGTGCTGGGAAAAGCACTGCGGTCGATGCCATCCTGGGCGGCCCGACATCTGAGTCCGACTGTACAGGCCCTGAGACACCAGTCACTGCCTGTCAGAAGAGACGCGTGACGCTGGCAGGACGACAGGTGGCTGTCGTGGACACACCTGACTGCCTGTGCATCGAGCGCCCCGCTGAGGACGTCCGCCGCCAGTTCTCACTCTGCGCCACTTTATCGGCCCCGGGGCCCCACGCTTTCCTGCTCTGTGTCCCCGTTCATCGGCCCAGCAACCTGGAGCTCCAGATTTTGGAGACCATCGAGAAGGTGTTTGGTCCTGAAGCGGTTAGTAAACACGCAATGGTGCTCTTCACTCGCATGGACCGCCTGCCCGAGGATGTTTCTCTGGATGAGTATCTCAGCACAGAACGGGCCGACTTACTAGAGCTCGTACAGAAGTGTGGGGATCGACACCACCCGCTGCGGCCGGGAGCGAATGCAGAGGAGAAGGACAACGTGAAGGAGCTGCTAATAAAGTGTGGTCGGGTGGCTTCTGTGGCTCCCGAATATGGTGAGGGGCAGTGCTTTACTGGGGTCGTTTGTGGGGTTGTTCGTCGGGGGGCCCTTAGGAGGGGCCATGGGAGCGACGGTGGGCTCTGTGGCGACGGAGATGGGTAGACGGAAAAAAAAAACCAACTGAGCACTTGAAAATTTGGTAACATCTTATTGTATTTTTCACCATTAACAAAACATTTAAAAAAACAGATCAGTTATTCTTATACATTCCGATGTGAATATACAGTCAAACCAAAATTTATTTAGACACCTTGAACATTTCATTCATTATTACAGTTTATTCACTATAGTTTAAAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTTAAACTGTGTCAGAAAAATTTAATCTTAATTATGTCAGATAACACTTAAGCAAAACATTGTTTAATATAATAACATTGTTTAATAACATAATATGTCACAGTTTACTTTATTTTGCTATCCTCACTTACATAAATAAACTATAGTGTCCTGCACCTACTAAAAAAATATCAAAAATGTCTGAATCATTTTTGGTTTGACTGTATAATCAGCTAATGAAATGCTTTTGCATGATTCTAGTTGAATACAAATTTTTTCCATTACAAAAATTATATTATTAACCAAATGATTTGAGTGAAAAGTTGATTTGAAAAATTAACGTGAAGTTCGGTCTTAGATTTTGCTTTAATGACAGAAGCACTTTACACAAGTTTGACGATCACGCTATCACAAGCTCTGTCACATGATTGCTTGTGTCATTTCTGACCCATAAATAATGCAAAATATTAAATTTTTTCATTAATTTTACCCTTATATCTTTTTTATTTTCAAAATCCTAAAATGTTCAGTTTAGACAGATTTTTAGTCTATATATAAATTATATAAAATAAATTGTGTATCTGTACGATTTTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU193731 lncRNA upstream 60994 4221283 ~ 4221496 (+) True G170528
TU193416 lncRNA upstream 61887 4218753 ~ 4220603 (+) True G170240
TU193730 lncRNA upstream 64334 4217889 ~ 4218156 (+) True G170527
TU193728 lncRNA upstream 64761 4216212 ~ 4217729 (+) True G170526
TU193719 lncRNA upstream 92079 4190047 ~ 4190411 (+) True G170520
TU193741 lncRNA downstream 33064 4318600 ~ 4319988 (+) True G170537
TU193751 lncRNA downstream 49441 4334977 ~ 4335206 (+) True G170545
TU193760 lncRNA downstream 64102 4349638 ~ 4349878 (+) True G170554
TU193765 lncRNA downstream 70366 4355902 ~ 4356118 (+) True G170559
TU193768 lncRNA downstream 75283 4360819 ~ 4361310 (+) True G170562
CI01000034_04260286_04274615.mRNA mRNA upstream 7088 4260286 ~ 4275402 (+) True CI01000034_04260286_04274615
CI01000034_04251494_04257594.mRNA mRNA upstream 24633 4251494 ~ 4257857 (+) True CI01000034_04251494_04257594
CI01000034_04244137_04250139.mRNA mRNA upstream 31897 4244137 ~ 4250593 (+) True CI01000034_04244137_04250139
CI01000034_04229970_04238150.mRNA mRNA upstream 44023 4229970 ~ 4238467 (+) True CI01000034_04229970_04238150
CI01000034_04222777_04228601.mRNA mRNA upstream 53745 4222597 ~ 4228745 (+) True CI01000034_04222777_04228601
CI01000034_04364393_04367046.mRNA mRNA downstream 78778 4364314 ~ 4367204 (+) True CI01000034_04364393_04367046
CI01000034_04473631_04513799.mRNA mRNA downstream 188095 4473631 ~ 4514545 (+) True CI01000034_04473631_04513799
CI01000034_04525428_04534655.mRNA mRNA downstream 239465 4525001 ~ 4535684 (+) True CI01000034_04525428_04534655
CI01000034_04548660_04597274.mRNA mRNA downstream 263051 4548587 ~ 4597396 (+) True CI01000034_04548660_04597274
CI01000034_04641898_04648112.mRNA mRNA downstream 355490 4641026 ~ 4648150 (+) True CI01000034_04641898_04648112
TU193723 other upstream 84289 4194638 ~ 4194993 (+) True G170522
TU193699 other upstream 155679 4125100 ~ 4126811 (+) True CI01000034_04125435_04125780
TU193348 other upstream 830641 3434136 ~ 3451849 (+) True G170172
TU192920 other upstream 1944800 2317973 ~ 2337690 (+) True G169806
TU192663 other upstream 2551313 1726510 ~ 1726632 (+) True G169586

Expression Profile