RNA id: TU255127



Basic Information


Item Value
RNA id TU255127
length 546
RNA type TUCP
GC content 0.50
exon number 2
gene id G224953
representative True

Chromosome Information


Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 3431136 ~ 3460136 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACTGTGGCTGAGCTCCAGAGATACAGTCGGGAGATGGGAGAAAGTTGTAGAAAGTCAACCATCACTGCAGCGCTCCACCAGTCGGGGCTTTATGGCAGAGTGGCCCGACGGAAGCCTCTCCTCAGTGCAAGACACATGAAAGCCCGCATGGAGTTTGCTAAAGATGGTGAGAAATAAGATTCTCTGGTCTGATGAGACCAAGATAGAACTTTTTGGCCTTAAATCTAAGCGGTATGTGTGGAGAAAACCAGGCACTGCTCATCACCTGTCCAATACAGTCCCAACAGTGAAGCATGGTGGTGGCAACATCATGCTGTGGGGGTGTTTTTCAGCTGCAGGGACAGGACGACTGGTTGCAATCGAGGGAAAGATGAATGCGGCCAAGTACAGGGATATCCTGGACGAAAATCTTCTCCAGAGTGCTCAGGACCTCAGACTGGGCCGAAGGTTTACCTTCCAACAAGACAATGACCCTAAGCACACAGCTAAAATAACGAAGGAGTGGCTTCACAACAACTCCGTGACTGTTCTTGAATGGCCCAGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU255123 lncRNA upstream 3372 3426339 ~ 3427764 (+) True G224949
TU255061 lncRNA upstream 50972 3379067 ~ 3380164 (+) True G224891
TU255072 lncRNA upstream 84424 3345273 ~ 3346712 (+) True G224898
TU255073 lncRNA upstream 150871 3280024 ~ 3280265 (+) True G224899
TU255030 lncRNA upstream 182078 3248733 ~ 3249058 (+) True G224863
CI01000052_03401048_03405703.mRNA mRNA upstream 24824 3400270 ~ 3406312 (+) True CI01000052_03401048_03405703
CI01000052_02850485_02858740.mRNA mRNA upstream 572275 2850355 ~ 2858861 (+) True CI01000052_02850485_02858740
CI01000052_02845585_02849894.mRNA mRNA upstream 581158 2845550 ~ 2849978 (+) True CI01000052_02845585_02849894
CI01000052_02646977_02647792.mRNA mRNA upstream 783312 2646223 ~ 2647824 (+) True CI01000052_02646977_02647792
CI01000052_02622010_02627854.mRNA mRNA upstream 802826 2620241 ~ 2628310 (+) False CI01000052_02622010_02627854
CI01000052_03484560_03485959.mRNA mRNA downstream 24424 3484560 ~ 3486253 (+) True CI01000052_03484560_03485959
CI01000052_03490583_03492859.mRNA mRNA downstream 30011 3490147 ~ 3492859 (+) True CI01000052_03490583_03492859
TU253739 other upstream 1326837 2049326 ~ 2104299 (+) False G223694
TU253734 other upstream 1326837 2098540 ~ 2104299 (+) False G223694
TU253572 other upstream 2160209 1270492 ~ 1270927 (+) True G223545

Expression Profile