Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU301410 |
| length | 3562 |
| lncRNA type | antisense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G265564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000063 |
| NCBI id | null |
| chromosome length | 7808773 |
| location | 5109364 ~ 5113104 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU301490 | lncRNA | downstream | 8378 | 5100356 ~ 5100986 (-) | True | G265625 |
| TU301485 | lncRNA | downstream | 82516 | 5026267 ~ 5026848 (-) | True | G265620 |
| TU301438 | lncRNA | downstream | 118764 | 4976411 ~ 4990600 (-) | True | G265574 |
| TU301475 | lncRNA | downstream | 151769 | 4956591 ~ 4957595 (-) | True | G265610 |
| TU301343 | lncRNA | downstream | 192528 | 4896943 ~ 4916836 (-) | True | G265504 |
| TU301500 | lncRNA | upstream | 12153 | 5125257 ~ 5125483 (-) | True | G265635 |
| TU301519 | lncRNA | upstream | 108632 | 5221736 ~ 5226842 (-) | True | G265653 |
| TU301540 | lncRNA | upstream | 151038 | 5264142 ~ 5264343 (-) | True | G265672 |
| TU301532 | lncRNA | upstream | 151388 | 5264492 ~ 5281847 (-) | True | G265665 |
| TU301566 | lncRNA | upstream | 213028 | 5326132 ~ 5329568 (-) | True | G265693 |
| CI01000063_05085075_05095432.mRNA | mRNA | downstream | 13837 | 5084268 ~ 5095527 (-) | True | CI01000063_05085075_05095432 |
| CI01000063_05070661_05081280.mRNA | mRNA | downstream | 28084 | 5070423 ~ 5081280 (-) | True | CI01000063_05070661_05081280 |
| CI01000063_05056169_05057789.mRNA | mRNA | downstream | 51509 | 5056169 ~ 5057855 (-) | True | CI01000063_05056169_05057789 |
| CI01000063_04834309_04848552.mRNA | mRNA | downstream | 260644 | 4834047 ~ 4848720 (-) | True | CI01000063_04834309_04848552 |
| CI01000063_04667829_04669237.mRNA | mRNA | downstream | 440127 | 4667166 ~ 4669237 (-) | True | CI01000063_04667829_04669237 |
| CI01000063_05160162_05161742.mRNA | mRNA | upstream | 45463 | 5158567 ~ 5163276 (-) | False | CI01000063_05160162_05161742 |
| CI01000063_05189361_05189645.mRNA | mRNA | upstream | 75391 | 5188495 ~ 5189645 (-) | False | CI01000063_05189361_05189645 |
| CI01000063_05198199_05217488.mRNA | mRNA | upstream | 85062 | 5198166 ~ 5217644 (-) | True | CI01000063_05198199_05217488 |
| CI01000063_05248902_05250362.mRNA | mRNA | upstream | 135593 | 5248697 ~ 5250625 (-) | True | CI01000063_05248902_05250362 |
| CI01000063_05252331_05253850.mRNA | mRNA | upstream | 138790 | 5251894 ~ 5253850 (-) | False | CI01000063_05252331_05253850 |
| TU298806 | other | downstream | 2382829 | 2725759 ~ 2726535 (-) | True | CI01000063_02725759_02726399 |
| TU298801 | other | downstream | 2781645 | 2325112 ~ 2327719 (-) | True | G263230 |
| TU298810 | other | downstream | 2931028 | 2176439 ~ 2177485 (-) | True | G263239 |
| TU298670 | other | downstream | 3439288 | 1669411 ~ 1670076 (-) | True | CI01000063_01669384_01670016 |
| TU301418 | other | upstream | 49390 | 5183279 ~ 5183287 (-) | True | G265567 |
| TU301411 | other | upstream | 75299 | 5190050 ~ 5190617 (-) | True | G265565 |
| TU301419 | other | upstream | 136901 | 5250005 ~ 5253811 (-) | False | CI01000063_05252331_05253850 |
| TU301420 | other | upstream | 136955 | 5250059 ~ 5253811 (-) | False | CI01000063_05252331_05253850 |
| TU301421 | other | upstream | 137062 | 5250166 ~ 5253811 (-) | False | CI01000063_05252331_05253850 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| mexican tetra (Astyanax mexicanus) | TU72221 | True | 2225 | TUCP | 0.37 | 4 | NC_035902.1 | 20681811 ~ 20690422 (-) |
