RNA id: TU331865


Basic Information

Item Value
RNA id TU331865
length 214
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G292460
representative True

Chromosome Information

Item Value
chromosome id CI01000080
NCBI id null
chromosome length 5175454
location 2851861 ~ 2852074 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAGCAAAGTCATTTGGAGCTTTTGTATTGCAGAATTTAATCATCAAAGCTCAAATGTATGAAATGTCACCTATAAATAAATAATAATGTCACTGTTAAAGACTCACACTAGCCAAAAATCTTATATTATTAAAATCTTAACATATTTCTTTTCTTAAAGTGGAACTGAATGAAGTAAAACTTCATGCACTACATATTGAATGGAAAAAGATAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU331858 lncRNA downstream 14385 2836257 ~ 2837476 (-) True G292453
TU331857 lncRNA downstream 16346 2835315 ~ 2835515 (-) True G292452
TU331856 lncRNA downstream 16685 2834828 ~ 2835176 (-) True G292451
TU331854 lncRNA downstream 18344 2833211 ~ 2833517 (-) True G292449
TU331840 lncRNA downstream 19138 2831954 ~ 2832723 (-) True G292435
TU331866 lncRNA upstream 83 2852157 ~ 2852571 (-) True G292461
TU331872 lncRNA upstream 75191 2927265 ~ 2927720 (-) False G292467
TU331873 lncRNA upstream 75191 2927265 ~ 2928026 (-) True G292467
TU331877 lncRNA upstream 91154 2943228 ~ 2943571 (-) True G292470
TU331899 lncRNA upstream 131852 2983926 ~ 2984409 (-) True G292486
CI01000080_02675714_02724087.mRNA mRNA downstream 127774 2675714 ~ 2724087 (-) True CI01000080_02675714_02724087
CI01000080_02626826_02665868.mRNA mRNA downstream 185993 2626586 ~ 2665868 (-) True CI01000080_02626826_02665868
CI01000080_02396817_02403243.mRNA mRNA downstream 448618 2396817 ~ 2403243 (-) True CI01000080_02396817_02403243
CI01000080_02377623_02390372.mRNA mRNA downstream 460580 2376786 ~ 2391281 (-) True CI01000080_02377623_02390372
CI01000080_02371817_02374191.mRNA mRNA downstream 477670 2371747 ~ 2374191 (-) True CI01000080_02371817_02374191
CI01000080_02890744_02893801.mRNA mRNA upstream 38460 2890534 ~ 2893801 (-) True CI01000080_02890744_02893801
CI01000080_02901179_02916041.mRNA mRNA upstream 49041 2901115 ~ 2917643 (-) True CI01000080_02901179_02916041
CI01000080_02998252_03001018.mRNA mRNA upstream 146034 2998108 ~ 3001673 (-) True CI01000080_02998252_03001018
CI01000080_03135523_03147452.mRNA mRNA upstream 282938 3135012 ~ 3147452 (-) True CI01000080_03135523_03147452
CI01000080_03187019_03196643.mRNA mRNA upstream 334417 3186491 ~ 3196643 (-) True CI01000080_03187019_03196643
TU331774 other downstream 108615 2733587 ~ 2743246 (-) True G292387
TU331720 other downstream 326452 2518078 ~ 2525409 (-) True G292349
TU331407 other downstream 1179941 1635762 ~ 1671920 (-) False G292089
TU331420 other downstream 1188843 1635762 ~ 1663018 (-) False G292089
TU329309 other downstream 2443717 407885 ~ 408144 (-) True G290314
TU331945 other upstream 356911 3208985 ~ 3218158 (-) False G292516
TU331946 other upstream 357160 3209234 ~ 3218158 (-) False G292516
TU331947 other upstream 357160 3209234 ~ 3218403 (-) False G292516
TU332208 other upstream 863407 3715481 ~ 3728010 (-) True G292714

Expression Profile