RNA id: TCONS_00017655


Basic Information

Item Value
RNA id TCONS_00017655
length 116
RNA type rRNA
GC content 0.55
exon number 1
gene id XLOC_008940
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 2736383 ~ 2736498 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gccacagccatgtcaccctgcagcccaagagcagtcactcactgaagctaagcagggctgagcatggtcagtacctggatgggagaccacatgggaaagttaggttgctgatggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176377

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019113 lncRNA downstream 110455 2618279 ~ 2625928 (-) False XLOC_008933
TCONS_00017646 lncRNA downstream 125213 2598804 ~ 2611170 (-) True XLOC_008932
TCONS_00018809 lncRNA downstream 140262 2590381 ~ 2596121 (-) True XLOC_008931
TCONS_00017644 lncRNA downstream 216780 2517783 ~ 2519603 (-) True XLOC_008930
TCONS_00019112 lncRNA downstream 408099 2323666 ~ 2328284 (-) True XLOC_008928
TCONS_00019114 lncRNA upstream 77018 2813516 ~ 2816142 (-) True XLOC_008942
TCONS_00017662 lncRNA upstream 181759 2918257 ~ 2931021 (-) True XLOC_008946
TCONS_00019115 lncRNA upstream 378839 3115337 ~ 3116262 (-) True XLOC_008951
TCONS_00019116 lncRNA upstream 423940 3160438 ~ 3162459 (-) True XLOC_008952
TCONS_00019117 lncRNA upstream 1018068 3754566 ~ 3760957 (-) True XLOC_008957
TCONS_00017654 mRNA downstream 1823 2727941 ~ 2734560 (-) True XLOC_008939
TCONS_00017652 mRNA downstream 9721 2700646 ~ 2726662 (-) True XLOC_008938
TCONS_00017651 mRNA downstream 78875 2655566 ~ 2657508 (-) True XLOC_008937
TCONS_00017650 mRNA downstream 83743 2650787 ~ 2652640 (-) True XLOC_008936
TCONS_00017649 mRNA downstream 95417 2638884 ~ 2640966 (-) True XLOC_008935
TCONS_00017656 mRNA upstream 40008 2776506 ~ 2803313 (-) True XLOC_008941
TCONS_00017658 mRNA upstream 84270 2820768 ~ 2841677 (-) False XLOC_008943
TCONS_00017657 mRNA upstream 84270 2820768 ~ 2841677 (-) True XLOC_008943
TCONS_00017659 mRNA upstream 114467 2850965 ~ 2856362 (-) False XLOC_008944
TCONS_00017660 mRNA upstream 114467 2850965 ~ 2857961 (-) True XLOC_008944
TCONS_00017647 other downstream 110720 2625028 ~ 2625663 (-) True XLOC_008933
TCONS_00017639 other downstream 470300 2265969 ~ 2266083 (-) True XLOC_008927
TCONS_00017627 other downstream 898500 1834971 ~ 1837883 (-) True XLOC_008922
TCONS_00017597 other downstream 1414477 1321790 ~ 1321906 (-) True XLOC_008910
TCONS_00017537 other downstream 2310627 425695 ~ 425756 (-) True XLOC_008873
TCONS_00017689 other upstream 1367910 4104408 ~ 4104526 (-) True XLOC_008968
TCONS_00017694 other upstream 1628660 4365158 ~ 4365272 (-) True XLOC_008973
TCONS_00017700 other upstream 1689996 4426494 ~ 4482147 (-) False XLOC_008974
TCONS_00017702 other upstream 1698967 4435465 ~ 4482230 (-) False XLOC_008974
TCONS_00017735 other upstream 2646564 5383062 ~ 5383180 (-) True XLOC_008997

Expression Profile

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