RNA id: TCONS_00017694



Basic Information


Item Value
RNA id TCONS_00017694
length 115
RNA type rRNA
GC content 0.57
exon number 1
gene id XLOC_008973
representative True

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 4365158 ~ 4365272 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aacagCAGCtacctctctgcaactctcacatggccgccctctgaagctaagcaggactgcaACCGGTCAGgtcctggatgggagaccacatgggataGCTAGGATGCTGCCGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000180699

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00019118 lncRNA downstream 190285 4163578 ~ 4174873 (-) True XLOC_008970
TCONS_00019117 lncRNA downstream 604201 3754566 ~ 3760957 (-) True XLOC_008957
TCONS_00019116 lncRNA downstream 1202699 3160438 ~ 3162459 (-) True XLOC_008952
TCONS_00019115 lncRNA downstream 1248896 3115337 ~ 3116262 (-) True XLOC_008951
TCONS_00017662 lncRNA downstream 1434137 2918257 ~ 2931021 (-) True XLOC_008946
TCONS_00017697 lncRNA upstream 57209 4422481 ~ 4436431 (-) False XLOC_008974
TCONS_00017701 lncRNA upstream 63746 4429018 ~ 4445598 (-) False XLOC_008974
TCONS_00017703 lncRNA upstream 79788 4445060 ~ 4485867 (-) True XLOC_008974
TCONS_00018810 lncRNA upstream 836979 5202251 ~ 5203167 (-) True XLOC_008986
TCONS_00018811 lncRNA upstream 850536 5215808 ~ 5217706 (-) True XLOC_008989
TCONS_00017691 mRNA downstream 51061 4172288 ~ 4314097 (-) False XLOC_008971
TCONS_00017692 mRNA downstream 51116 4313079 ~ 4314042 (-) True XLOC_008971
TCONS_00017690 mRNA downstream 212576 4128560 ~ 4152582 (-) True XLOC_008969
TCONS_00017688 mRNA downstream 241059 4101254 ~ 4124099 (-) False XLOC_008968
TCONS_00017687 mRNA downstream 270270 4085623 ~ 4094888 (-) True XLOC_008967
TCONS_00017695 mRNA upstream 56525 4421797 ~ 4528387 (-) False XLOC_008974
TCONS_00017696 mRNA upstream 56526 4421798 ~ 4528387 (-) False XLOC_008974
TCONS_00017698 mRNA upstream 60851 4426123 ~ 4528326 (-) False XLOC_008974
TCONS_00017699 mRNA upstream 61119 4426391 ~ 4485828 (-) False XLOC_008974
TCONS_00017704 mRNA upstream 183968 4549240 ~ 4580763 (-) False XLOC_008975
TCONS_00017689 other downstream 260632 4104408 ~ 4104526 (-) True XLOC_008968
TCONS_00017655 other downstream 1628660 2736383 ~ 2736498 (-) True XLOC_008940
TCONS_00017647 other downstream 1739495 2625028 ~ 2625663 (-) True XLOC_008933
TCONS_00017639 other downstream 2099075 2265969 ~ 2266083 (-) True XLOC_008927
TCONS_00017627 other downstream 2527275 1834971 ~ 1837883 (-) True XLOC_008922
TCONS_00017700 other upstream 61222 4426494 ~ 4482147 (-) False XLOC_008974
TCONS_00017702 other upstream 70193 4435465 ~ 4482230 (-) False XLOC_008974
TCONS_00017735 other upstream 1017790 5383062 ~ 5383180 (-) True XLOC_008997
TCONS_00017752 other upstream 1424066 5789338 ~ 5795415 (-) False XLOC_009005
TCONS_00017769 other upstream 2561746 6927018 ~ 6946091 (-) False XLOC_009012