RNA id: TCONS_00017735


Basic Information

Item Value
RNA id TCONS_00017735
length 119
RNA type rRNA
GC content 0.51
exon number 1
gene id XLOC_008997
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 5383062 ~ 5383180 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

atatacagccatatcaccctgcagcccaaggccagttactcactgaggctaagcagggctgagcctggtcagaacCTGGGATGAGAGACAACATGGGAcaaactaggttgctgtttgaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000118068

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00018811 lncRNA downstream 165356 5215808 ~ 5217706 (-) True XLOC_008989
TCONS_00018810 lncRNA downstream 179895 5202251 ~ 5203167 (-) True XLOC_008986
TCONS_00017703 lncRNA downstream 897195 4445060 ~ 4485867 (-) True XLOC_008974
TCONS_00017701 lncRNA downstream 937464 4429018 ~ 4445598 (-) False XLOC_008974
TCONS_00017697 lncRNA downstream 946631 4422481 ~ 4436431 (-) False XLOC_008974
TCONS_00017751 lncRNA upstream 404006 5787186 ~ 5791331 (-) False XLOC_009005
TCONS_00017753 lncRNA upstream 411783 5794963 ~ 5797918 (-) True XLOC_009005
TCONS_00017759 lncRNA upstream 515230 5898410 ~ 5901485 (-) False XLOC_009008
TCONS_00019119 lncRNA upstream 515230 5898410 ~ 5901982 (-) False XLOC_009008
TCONS_00017758 lncRNA upstream 515724 5898904 ~ 5901478 (-) False XLOC_009008
TCONS_00017734 mRNA downstream 73849 5307128 ~ 5309213 (-) True XLOC_008996
TCONS_00017733 mRNA downstream 120120 5261649 ~ 5262942 (-) True XLOC_008995
TCONS_00017732 mRNA downstream 130389 5250954 ~ 5252673 (-) True XLOC_008994
TCONS_00017731 mRNA downstream 137310 5245347 ~ 5245752 (-) True XLOC_008993
TCONS_00017730 mRNA downstream 137336 5242840 ~ 5245726 (-) False XLOC_008993
TCONS_00017736 mRNA upstream 7554 5390734 ~ 5467477 (-) True XLOC_008998
TCONS_00017737 mRNA upstream 111823 5495003 ~ 5524271 (-) True XLOC_008999
TCONS_00017738 mRNA upstream 158888 5542068 ~ 5563551 (-) True XLOC_009000
TCONS_00017739 mRNA upstream 182461 5565641 ~ 5624361 (-) False XLOC_009001
TCONS_00017740 mRNA upstream 183006 5566186 ~ 5624456 (-) False XLOC_009001
TCONS_00017702 other downstream 900832 4435465 ~ 4482230 (-) False XLOC_008974
TCONS_00017700 other downstream 900915 4426494 ~ 4482147 (-) False XLOC_008974
TCONS_00017694 other downstream 1017790 4365158 ~ 4365272 (-) True XLOC_008973
TCONS_00017689 other downstream 1278536 4104408 ~ 4104526 (-) True XLOC_008968
TCONS_00017655 other downstream 2646564 2736383 ~ 2736498 (-) True XLOC_008940
TCONS_00017752 other upstream 406158 5789338 ~ 5795415 (-) False XLOC_009005
TCONS_00017769 other upstream 1543838 6927018 ~ 6946091 (-) False XLOC_009012
TCONS_00017770 other upstream 1555708 6938888 ~ 6940927 (-) True XLOC_009012
TCONS_00017772 other upstream 1565491 6948671 ~ 6966239 (-) False XLOC_009013
TCONS_00017773 other upstream 1565713 6948893 ~ 6966245 (-) False XLOC_009013