RNA id: TCONS_00001432


Basic Information

Item Value
RNA id TCONS_00001432
length 729
RNA type mRNA
GC content 0.60
exon number 3
gene id XLOC_000905
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 60979 ~ 65017 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgcgtgcgagagagagagagagcctacTGTGCCGAGACGGAGCTCCTCCTCGGTGTGTGTCGGTAACGCGCGCGCCTCACAGTCCCGTTATTCCCGACAGCAGAACACACGGGCGAGCAGGAATGGAAAACCGGAGGAAAACACGCGACATGGCCGAGAGAACACACCGATTTCTGGTGCTGTCGGTGCTCAGATGCTGGATCTCCCTGCTGGGCTTTACAGGTGTGTGTGCAGCGGTGCAGGTGTCGGTGCGGGACTCTCGCCGGTTCGCCCTGCTTTTCCAGCCAGTAGTGCTGCAGTGCCGGTACAGCAGTGTGTCCACGCAGACGCCGGTGGTGCAGTGGTGGTTTAAGTCTTTCTGCCGCGACCGCGCACGAGACTCCTTCCGCTTCCCACAAGCGCCGccagtgcgcacacacacactcacacactctgaACTCGAGCATGAGCCCTCTGGTCAGCGGGACTGCGGGGACAGCGGCCGCACCGTGCGCATTGTGGCGTCAAGTCAGGGGCCGGCATACACCCTGGCGGAACACTACCGGGGCCGAGACATCGCCATCATCAACAaagCTGACCTGCGCATTGGCGAGCTGCAGTGGGGTGACAGTGGTGTTTATTATTGTAAAGTGGTGATTTCGGATGATCTGGAGGGACAGAATGAAGACCACGTGGAGCTGCTGGTTCTGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000168609

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00003284 lncRNA downstream 11145 47420 ~ 49842 (-) False XLOC_000904
TCONS_00001430 lncRNA downstream 11145 48877 ~ 49842 (-) True XLOC_000904
TCONS_00001428 lncRNA downstream 11292 47820 ~ 49695 (-) False XLOC_000904
TCONS_00001427 lncRNA downstream 12910 47420 ~ 48077 (-) False XLOC_000904
TCONS_00001423 lncRNA downstream 16441 42839 ~ 44546 (-) False XLOC_000903
TCONS_00001433 lncRNA upstream 688 65705 ~ 71494 (-) False XLOC_000906
TCONS_00001438 lncRNA upstream 2873 67890 ~ 71472 (-) True XLOC_000906
TCONS_00001439 lncRNA upstream 43268 108285 ~ 110804 (-) False XLOC_000907
TCONS_00003285 lncRNA upstream 43268 108285 ~ 147846 (-) True XLOC_000907
TCONS_00003286 lncRNA upstream 76272 141289 ~ 142119 (-) True XLOC_000908
TCONS_00001425 mRNA downstream 10740 44839 ~ 50247 (-) False XLOC_000904
TCONS_00001426 mRNA downstream 12054 46037 ~ 48933 (-) False XLOC_000904
TCONS_00001418 mRNA downstream 16422 39325 ~ 44565 (-) False XLOC_000903
TCONS_00001435 mRNA upstream 688 65705 ~ 71523 (-) False XLOC_000906
TCONS_00001434 mRNA upstream 688 65705 ~ 71523 (-) False XLOC_000906
TCONS_00001436 mRNA upstream 1266 66283 ~ 69444 (-) False XLOC_000906
TCONS_00001437 mRNA upstream 2870 67887 ~ 71470 (-) False XLOC_000906
TCONS_00001440 mRNA upstream 86990 152007 ~ 157563 (-) False XLOC_000909
TCONS_00001429 other downstream 11152 47954 ~ 49835 (-) False XLOC_000904
TCONS_00001421 other downstream 16441 42204 ~ 44546 (-) False XLOC_000903
TCONS_00001442 other upstream 88221 153238 ~ 153846 (-) False XLOC_000909
TCONS_00001460 other upstream 402726 467743 ~ 471925 (-) True XLOC_000917
TCONS_00001476 other upstream 556008 621025 ~ 625080 (-) False XLOC_000923
TCONS_00001485 other upstream 985924 1050941 ~ 1051057 (-) True XLOC_000930
TCONS_00001486 other upstream 1248588 1313605 ~ 1315753 (-) True XLOC_000932

Expression Profile

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