RNA id: TU424410


Basic Information

Item Value
RNA id TU424410
length 216
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G371647
representative True

Chromosome Information

Item Value
chromosome id CI01000169
NCBI id null
chromosome length 1065687
location 824492 ~ 824707 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTAAAAACCGCAATGGAAAGTGAGATTCTCTTAAAGGTAAAATGCACTGGCTTCTTTCCAATGAACGCCTATTGTTTATTACTAAACCTTAATTTATGCACACAGGTGACTTCTGCAGGCAGGAGGGATGCTGGAAATGAAAACAATAAACAGAAACATGGCTGTTGCCATAGAACAAGGTCAAAAGGGACATGATGGATCTTATGCAAGACGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU424404 lncRNA downstream 13116 811074 ~ 811376 (-) True G371641
TU424402 lncRNA downstream 14259 810029 ~ 810233 (-) True G371639
TU424401 lncRNA downstream 14729 809554 ~ 809763 (-) True G371638
TU424200 lncRNA downstream 16223 755064 ~ 808269 (-) True G371454
TU424371 lncRNA downstream 112843 711217 ~ 711649 (-) True CI01000169_00708005_00711176
TU424416 lncRNA upstream 5168 829875 ~ 830597 (-) True G371650
TU424417 lncRNA upstream 7626 832333 ~ 844044 (-) True G371651
TU424419 lncRNA upstream 12470 837177 ~ 837782 (-) True G371653
TU424420 lncRNA upstream 17682 842389 ~ 843380 (-) True G371654
TU424421 lncRNA upstream 20565 845272 ~ 846061 (-) True G371655
CI01000169_00801511_00803912.mRNA mRNA downstream 20580 800056 ~ 803912 (-) True CI01000169_00801511_00803912
CI01000169_00769848_00794717.mRNA mRNA downstream 29116 769609 ~ 795376 (-) True CI01000169_00769848_00794717
CI01000169_00708005_00711176.mRNA mRNA downstream 113132 706857 ~ 711360 (-) False CI01000169_00708005_00711176
CI01000169_00679772_00703207.mRNA mRNA downstream 121285 678896 ~ 703207 (-) True CI01000169_00679772_00703207
CI01000169_00659765_00662464.mRNA mRNA downstream 162028 659595 ~ 662464 (-) False CI01000169_00659765_00662464
CI01000169_00858567_00865583.mRNA mRNA upstream 33364 858071 ~ 865583 (-) True CI01000169_00858567_00865583
CI01000169_00885977_00886294.mRNA mRNA upstream 60813 885520 ~ 886475 (-) True CI01000169_00885977_00886294
CI01000169_00895811_00905628.mRNA mRNA upstream 70617 895324 ~ 905628 (-) True CI01000169_00895811_00905628
CI01000169_01038714_01039940.mRNA mRNA upstream 213953 1038660 ~ 1040417 (-) True CI01000169_01038714_01039940
CI01000169_01049597_01056495.mRNA mRNA upstream 224570 1049277 ~ 1056794 (-) True CI01000169_01049597_01056495
TU424170 other downstream 161782 662695 ~ 662710 (-) True G371431
TU424171 other downstream 161782 659458 ~ 662710 (-) True CI01000169_00659765_00662464
TU424183 other downstream 393289 421926 ~ 431203 (-) True G371440

Expression Profile