Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001507 |
| length | 1568 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 1 |
| gene id | XLOC_000947 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 2446996 ~ 2453185 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0042219 | cellular modified amino acid catabolic process | biological_process |
| GO:0005829 | cytosol | cellular_component |
| GO:0061929 | gamma-glutamylaminecyclotransferase activity | molecular_function |
| GO:0016829 | lyase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070424-26 | Predicted to enable gamma-glutamylaminecyclotransferase activity. Predicted to be involved in cellular modified amino acid catabolic process. Predicted to be active in cytosol. Orthologous to human GGACT (gamma-glutamylamine cyclotransferase). |
| ensembl_id | ENSDART00000190207 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003304 | lncRNA | downstream | 195989 | 2239211 ~ 2251036 (-) | True | XLOC_000945 |
| TCONS_00003303 | lncRNA | downstream | 345764 | 2093996 ~ 2101261 (-) | True | XLOC_000944 |
| TCONS_00003302 | lncRNA | downstream | 350676 | 2093996 ~ 2096349 (-) | False | XLOC_000944 |
| TCONS_00003301 | lncRNA | downstream | 441490 | 2000666 ~ 2005535 (-) | True | XLOC_000940 |
| TCONS_00003300 | lncRNA | downstream | 441503 | 2000666 ~ 2005522 (-) | False | XLOC_000940 |
| TCONS_00002901 | lncRNA | upstream | 46429 | 2495021 ~ 2502744 (-) | False | XLOC_000949 |
| TCONS_00003305 | lncRNA | upstream | 49281 | 2497873 ~ 2502743 (-) | True | XLOC_000949 |
| TCONS_00001511 | lncRNA | upstream | 256012 | 2704604 ~ 2714275 (-) | True | XLOC_000950 |
| TCONS_00003306 | lncRNA | upstream | 848015 | 3296607 ~ 3299853 (-) | False | XLOC_000952 |
| TCONS_00001519 | lncRNA | upstream | 856957 | 3305549 ~ 3309194 (-) | False | XLOC_000953 |
| TCONS_00001505 | mRNA | downstream | 112771 | 2331637 ~ 2334254 (-) | True | XLOC_000946 |
| TCONS_00001504 | mRNA | downstream | 371496 | 2074513 ~ 2075529 (-) | True | XLOC_000943 |
| TCONS_00001503 | mRNA | downstream | 385606 | 2060430 ~ 2061419 (-) | True | XLOC_000942 |
| TCONS_00001502 | mRNA | downstream | 395426 | 2048047 ~ 2051599 (-) | True | XLOC_000941 |
| TCONS_00001499 | mRNA | downstream | 552303 | 1888541 ~ 1894722 (-) | False | XLOC_000939 |
| TCONS_00001509 | mRNA | upstream | 1548 | 2450140 ~ 2453174 (-) | True | XLOC_000947 |
| TCONS_00001510 | mRNA | upstream | 5502 | 2454094 ~ 2457546 (-) | True | XLOC_000948 |
| TCONS_00001512 | mRNA | upstream | 651652 | 3100244 ~ 3295045 (-) | True | XLOC_000951 |
| TCONS_00001524 | mRNA | upstream | 2905897 | 5354489 ~ 5394752 (-) | False | XLOC_000963 |
| TCONS_00001525 | mRNA | upstream | 2914977 | 5363569 ~ 5394791 (-) | True | XLOC_000963 |
| TCONS_00001497 | other | downstream | 518914 | 1884360 ~ 1928111 (-) | False | XLOC_000939 |
| TCONS_00001500 | other | downstream | 553020 | 1890171 ~ 1894005 (-) | False | XLOC_000939 |
| TCONS_00001493 | other | downstream | 561425 | 1874008 ~ 1885600 (-) | False | XLOC_000939 |
| TCONS_00001492 | other | downstream | 571907 | 1870861 ~ 1875118 (-) | False | XLOC_000939 |
| TCONS_00001486 | other | downstream | 1131272 | 1313605 ~ 1315753 (-) | True | XLOC_000932 |
| TCONS_00001513 | other | upstream | 848775 | 3297367 ~ 3297451 (-) | False | XLOC_000952 |
| TCONS_00001514 | other | upstream | 848892 | 3297484 ~ 3297570 (-) | False | XLOC_000952 |
| TCONS_00001515 | other | upstream | 849011 | 3297603 ~ 3297755 (-) | False | XLOC_000952 |
| TCONS_00001516 | other | upstream | 849256 | 3297848 ~ 3297936 (-) | False | XLOC_000952 |
| TCONS_00001517 | other | upstream | 849414 | 3298006 ~ 3298088 (-) | False | XLOC_000952 |
