RNA id: TU452981


Basic Information

Item Value
RNA id TU452981
length 324
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G395330
representative True

Chromosome Information

Item Value
chromosome id CI01000225
NCBI id null
chromosome length 750214
location 413743 ~ 414066 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACACACTTCTAATGCTTTCAGAAAGTGTTCTTGTATACGTGGTTTATGAGGACACAAATGTGTATAATGACATGGGTATTACAACATAAACATGGTTTATGAGGACACTTCCTGTGTCCTCATAAACCATGATGGGAAGGTTTAGGGGTAGGGGTAGTGTAGGGGGATATAATATACAGTTTGTACAGTATAAAAACCATTACGCCTATGGAGAGTCCCTGTAAACCACATATACAAGTGTGTGTGTGTGTGTGTGTGCACACACACGCTTTCATGTTTTATGGGGACATTCCATAGATAATGATTTTTATATTGTACTGTAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU452739 lncRNA downstream 164313 249221 ~ 249430 (-) True G395150
TU452731 lncRNA downstream 179429 220464 ~ 234314 (-) True G395142
TU452712 lncRNA downstream 219183 193310 ~ 194560 (-) True G395123
TU452702 lncRNA downstream 226541 186842 ~ 187202 (-) True G395114
TU452684 lncRNA downstream 285646 119985 ~ 125745 (-) True G395099
TU452984 lncRNA upstream 2236 416302 ~ 416743 (-) True G395333
TU452986 lncRNA upstream 4248 418314 ~ 418574 (-) True G395335
TU452963 lncRNA upstream 5288 419354 ~ 419651 (-) True G395314
TU453004 lncRNA upstream 39181 453247 ~ 454400 (-) True G395341
TU453011 lncRNA upstream 46109 460175 ~ 460425 (-) True G395347
CI01000225_00404519_00407448.mRNA mRNA downstream 5114 404375 ~ 408629 (-) True CI01000225_00404519_00407448
CI01000225_00393863_00402338.mRNA mRNA downstream 11205 393863 ~ 402538 (-) True CI01000225_00393863_00402338
CI01000225_00383340_00392393.mRNA mRNA downstream 21350 383087 ~ 392393 (-) True CI01000225_00383340_00392393
CI01000225_00195825_00204991.mRNA mRNA downstream 208752 195709 ~ 204991 (-) True CI01000225_00195825_00204991
CI01000225_00166452_00178904.mRNA mRNA downstream 234839 164269 ~ 178904 (-) True CI01000225_00166452_00178904
CI01000225_00425270_00431446.mRNA mRNA upstream 10533 424599 ~ 431446 (-) True CI01000225_00425270_00431446
CI01000225_00553926_00616121.mRNA mRNA upstream 139860 553926 ~ 616121 (-) True CI01000225_00553926_00616121
CI01000225_00724320_00725003.mRNA mRNA upstream 310235 724301 ~ 725325 (-) False CI01000225_00724320_00725003

Expression Profile