RNA id: CI01000299_00448948_00449565.mRNA



Basic Information


Item Value
RNA id CI01000299_00448948_00449565.mRNA
length 895
RNA type mRNA
GC content 0.45
exon number 1
gene id CI01000299_00448948_00449565
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 448863 ~ 449757 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTATAGTGTTTAAAAGGTCAAATATTCAGGTCAAGAGTATAAAGACTTTTGGTATACACTGGCGCACTGATATAGAGAATAACTCCTTTTGAGGGACTTTGTAACTTTGCAGACCTTTGCTCATGCAGTAACATTACACACTAAATAATGTTAATGTGTAAAAAAAGCATAATAGGCTCTCTTTCAAGATAATGAATGTAGATGGATTTATCATGAAGACACAGTTTACACTGTTGTTTTTCAGACTTTTAACTGTCAGTGAATTGATTCTGAATCATAATGAAGTGTGTCATCTGTTTCACCCACAGGTCATTGTTAGTGTCTTTCGCGCGGTGCACATGGAGCAAATCTTCGTGTACGGGACACTAAAGAAAGGCCAGCCCAACTACTTCAGGATGATGGACCCTGACAACGGTCGGGCCGAGTTTGTAGCTCACGCTCGCACAGTGGAGCGATACCCGCTCGTGATCGCCACCAAAAACAACATCCCCTTCCTGCTCAACGTCCCTGGGAAGGGTCAGCGCGTCCAGGGCGAGATCTACAGCGTGGACCAGAAGATGCTGAAGTTCCTGGATGAGTTTGAAAGTTGCCCAGACTTGTACCAGCGCACAACTGTCCAGCTGGAGGTGCAGGACGGGCTCGGTGAAGGGGAAAACACGCTGGAGTCTGGAAGTTTCGTCAATGCCTCTGTGTACAGCACGACTACATATGAACCCGAGTGGCTCCAAAAACCAACATATGAGAGTTATGATGCTCACGGTGATCACGGACTGCGATATGTGCGTCGTGAAGACAGAAGCCCAGAGTAACTACTGTAGTAACATTTACTAGGATTTCACCACACCTGCTAGTGTCGCGTAAATTTAATTTACCATTCAGACATTTTGCAACAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU464230 lncRNA downstream 2384 444789 ~ 446479 (-) True G403838
TU464233 lncRNA downstream 10077 438309 ~ 438786 (-) True G403841
TU464232 lncRNA downstream 15274 433359 ~ 433589 (-) True G403840
TU464250 lncRNA downstream 18898 429635 ~ 429965 (-) True G403858
TU464249 lncRNA downstream 19434 428433 ~ 429429 (-) True G403857
TU464258 lncRNA upstream 16917 466674 ~ 466935 (-) True G403866
TU464259 lncRNA upstream 17393 467150 ~ 467350 (-) True G403867
TU464267 lncRNA upstream 28213 477970 ~ 478252 (-) True G403874
TU464268 lncRNA upstream 28787 478544 ~ 479150 (-) True G403875
TU464307 lncRNA upstream 75764 525521 ~ 525854 (-) True G403913
CI01000299_00185106_00209299.mRNA mRNA downstream 239564 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 277877 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00452374_00452868.mRNA mRNA upstream 1584 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00670925_00672195.mRNA mRNA upstream 220923 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 553562 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 608063 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
CI01000299_01114487_01122666.mRNA mRNA upstream 663993 1113750 ~ 1124230 (-) True CI01000299_01114487_01122666
TU464604 other upstream 221077 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 620850 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1209898 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1405882 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1567930 2017687 ~ 2018050 (-) True G405053

Expression Profile