RNA id: CI01000299_01419938_01421048.mRNA


Basic Information

Item Value
RNA id CI01000299_01419938_01421048.mRNA
length 717
RNA type mRNA
GC content 0.38
exon number 2
gene id CI01000299_01419938_01421048
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1419529 ~ 1421048 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAGACTAAAACCCAAAGTGTCCATTAAACCTGATCAACATGTATTCAGAGGAGAGACAGTCACTCTCAGATGTGACATTGATGCTGAAGGAGTCACTAGCTGGAGGTACTACTGGTATAAAGGAGGTTCATTCAGTTTTTTCAGTCAACTACAGGAACTCACATTCAGTTCTGTTTCTGAGTCTGACGCTGGTAAATACTCCTGTAATGGAACAGAGACTGAAGGATCACGCAGATCACACCGCAGTGATGAAGTTACACTGACAGTATCAGATGTGTTTAATATTCTGGCCACCTCATGTATGTAAATAAGAAACCCATCTGAACACAATGTAGTGCAACATCACCTTTAACTATGACCTCAGTATTGAATTTACACATTTCTGGCTGATTATAAACTTCATTAAAGTAGAATTCCTGGCAGAGCTGTTGTATTGAATTACACTAGATTGTAAAGGTGTTCCTAATATAGTGGCCACTAAGTGTATGCAACCTCCTTACTCTGTTATTCTCTGGTACTTTAAAGAACTGGCAACTAAGTGTTGCTAACATTAACAACAAATCTAATAACCGAAGCTAAACGTTGTTTGACAACGAACTTGTAAATGTAAAGGTAAATGTAGCCTAACTGACGTCAGGTTATAGCTAAAGTTAGTGAAGTGTTGGTCACTTAAGCTAGCTGCAATTAGAGTCTAACAAACGTTATCTTCCAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU465037 lncRNA downstream 15174 1403914 ~ 1404355 (-) True G404604
TU464973 lncRNA downstream 109757 1309554 ~ 1309772 (-) True G404541
TU464925 lncRNA downstream 207599 1211707 ~ 1211930 (-) True G404493
TU464918 lncRNA downstream 218858 1199357 ~ 1200671 (-) True G404486
TU464916 lncRNA downstream 221288 1197441 ~ 1198241 (-) True G404484
TU465103 lncRNA upstream 45793 1466841 ~ 1500623 (-) True G404669
TU465212 lncRNA upstream 183252 1604300 ~ 1604628 (-) True G404771
TU465213 lncRNA upstream 183662 1604710 ~ 1605108 (-) True G404772
TU465218 lncRNA upstream 210848 1631896 ~ 1632336 (-) True G404777
TU465219 lncRNA upstream 214629 1635677 ~ 1635957 (-) True G404778
CI01000299_01338052_01368900.mRNA mRNA downstream 50153 1337872 ~ 1369376 (-) True CI01000299_01338052_01368900
CI01000299_01222994_01268707.mRNA mRNA downstream 149203 1222859 ~ 1270326 (-) True CI01000299_01222994_01268707
CI01000299_01114487_01122666.mRNA mRNA downstream 295299 1113750 ~ 1124230 (-) True CI01000299_01114487_01122666
CI01000299_01057889_01063623.mRNA mRNA downstream 355906 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
CI01000299_01003547_01034507.mRNA mRNA downstream 384717 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01693958_01696561.mRNA mRNA upstream 271876 1692924 ~ 1697305 (-) True CI01000299_01693958_01696561
CI01000299_02670695_02682116.mRNA mRNA upstream 1249548 2670596 ~ 2682116 (-) True CI01000299_02670695_02682116
CI01000299_02723315_02728716.mRNA mRNA upstream 1302172 2723220 ~ 2728753 (-) True CI01000299_02723315_02728716
CI01000299_02761916_02788258.mRNA mRNA upstream 1340366 2761414 ~ 2788437 (-) True CI01000299_02761916_02788258
CI01000299_02833341_02845817.mRNA mRNA upstream 1412042 2833090 ~ 2845870 (-) True CI01000299_02833341_02845817
TU464792 other downstream 343638 1070607 ~ 1075891 (-) True G404372
TU464604 other downstream 746673 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU465225 other upstream 238607 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 434591 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 596639 2017687 ~ 2018050 (-) True G405053
TU467961 other upstream 2720070 4163313 ~ 4164324 (-) True CI01000299_04158468_04164223
TU468104 other upstream 3054946 4475994 ~ 4550721 (-) True G407413

Expression Profile