Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000299_04892566_04900169.mRNA |
| length | 4240 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 9 |
| gene id | CI01000299_04892566_04900169 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000299 |
| NCBI id | null |
| chromosome length | 6567443 |
| location | 4890391 ~ 4900536 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU466552 | lncRNA | upstream | 124168 | 4690895 ~ 4766223 (+) | True | G406023 |
| TU466373 | lncRNA | upstream | 185611 | 4702382 ~ 4702508 (+) | False | G405864 |
| TU466490 | lncRNA | upstream | 218496 | 4671525 ~ 4671895 (+) | True | G405967 |
| TU466489 | lncRNA | upstream | 218909 | 4671215 ~ 4671482 (+) | True | G405966 |
| TU466381 | lncRNA | upstream | 225347 | 4663934 ~ 4665044 (+) | True | G405865 |
| TU466536 | lncRNA | downstream | 9381 | 4910196 ~ 4912524 (+) | True | G406007 |
| TU466528 | lncRNA | downstream | 33779 | 4934315 ~ 4936448 (+) | True | G405999 |
| TU466657 | lncRNA | downstream | 55614 | 4956150 ~ 4956356 (+) | True | G406101 |
| TU466701 | lncRNA | downstream | 356203 | 5256739 ~ 5257212 (+) | True | G406134 |
| TU466774 | lncRNA | downstream | 411632 | 5312168 ~ 5745426 (+) | True | G406203 |
| CI01000299_04864582_04885052.mRNA | mRNA | upstream | 5006 | 4864192 ~ 4885385 (+) | True | CI01000299_04864582_04885052 |
| CI01000299_04819297_04829755.mRNA | mRNA | upstream | 60404 | 4818685 ~ 4829987 (+) | True | CI01000299_04819297_04829755 |
| CI01000299_04736806_04740333.mRNA | mRNA | upstream | 149416 | 4736806 ~ 4740975 (+) | True | CI01000299_04736806_04740333 |
| CI01000299_04703290_04704365.mRNA | mRNA | upstream | 185794 | 4703071 ~ 4704597 (+) | False | CI01000299_04703290_04704365 |
| CI01000299_04554181_04557794.mRNA | mRNA | upstream | 332551 | 4554111 ~ 4557840 (+) | True | CI01000299_04554181_04557794 |
| CI01000299_04906697_04907091.mRNA | mRNA | downstream | 6161 | 4906697 ~ 4910073 (+) | False | CI01000299_04906697_04907091 |
| CI01000299_05128395_05192154.mRNA | mRNA | downstream | 227812 | 5128348 ~ 5192994 (+) | True | CI01000299_05128395_05192154 |
| CI01000299_05254419_05314859.mRNA | mRNA | downstream | 353883 | 5254419 ~ 5316243 (+) | True | CI01000299_05254419_05314859 |
| CI01000299_05331367_05364944.mRNA | mRNA | downstream | 430665 | 5331201 ~ 5364977 (+) | True | CI01000299_05331367_05364944 |
| CI01000299_05392812_05418070.mRNA | mRNA | downstream | 492156 | 5392692 ~ 5418352 (+) | True | CI01000299_05392812_05418070 |
| TU466374 | other | upstream | 185766 | 4702382 ~ 4702508 (+) | True | G405864 |
| TU466383 | other | upstream | 384474 | 4505404 ~ 4505917 (+) | True | G405866 |
| TU466350 | other | upstream | 570250 | 4295533 ~ 4320141 (+) | True | G405842 |
| TU466041 | other | upstream | 756450 | 4131258 ~ 4133941 (+) | True | CI01000299_04131136_04133439 |
| TU466101 | other | upstream | 1735217 | 3154597 ~ 3155174 (+) | True | G405609 |
| TU466651 | other | downstream | 23926 | 4924462 ~ 4927844 (+) | True | G406096 |
| TU466818 | other | downstream | 470645 | 5371181 ~ 5373579 (+) | True | G406244 |
| TU466732 | other | downstream | 1337302 | 6237838 ~ 6300508 (+) | True | G406161 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00001487 | True | 936 | lncRNA | 0.56 | 3 | NC_007112.7 | 1350111 ~ 1352997 (-) |
| rainbow trout (Oncorhynchus mykiss) | TU144714 | True | 236 | lncRNA | 0.39 | 1 | NC_048566.1 | 24707474 ~ 24707709 (-) |
| eurasian perch (Perca fluviatilis) | TU144714 | True | 269 | lncRNA | 0.32 | 2 | NC_053121.1 | 24427274 ~ 24427808 (+) |
| mexican tetra (Astyanax mexicanus) | TU144714 | True | 983 | TUCP | 0.48 | 3 | NC_035908.1 | 29552132 ~ 29557993 (-) |
