RNA id: CI01000299_06424909_06425694.mRNA



Basic Information


Item Value
RNA id CI01000299_06424909_06425694.mRNA
length 923
RNA type mRNA
GC content 0.34
exon number 1
gene id CI01000299_06424909_06425694
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6424811 ~ 6425733 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATATAAATATTGTAGATAATGACCACATACTCAATGACACCACGTTTCACTCCTCATCAAGTATCACACCAAGAAACAGCTACGATAGTTTAGTCAATATGAATGGAACGCAAATGTTAAAACTCTGTAAAGGTTTAGGGATATACATCATTAATGGCAGAACTAGAGGAGATACATTAGGTAGATTCACCTATTGCTCTGTGGTTGATTATTCAATAACAGATATTGATCCAAATTTTATTAATGCCTTCACAGTCAGACCTCAGCTCCCGATTTCCGATCACTGCCAAACAGTGCTTTACCTGAAACCACCATGTGAAAGGACCAACACTTCTCCACTCGAATCTGAAAAAATGTTTCCTCTGAAACCTAAACTAAAGTGGAACCAATCTGAACAATTCAAAGAACACATAAACAATCCTACTATATTAAAAATGCTGGATGACTTTATATCCACTAATTTCACCTTAGATATTAATGGGATAAATTTAGCAACAAAAAACTTAAATTACATATTCAAAACATTGGCAACTCTATCTAACATTAAACGACAATGCAAACGTAAAACAAATCAGCAGACAATGAGAAAGGATGTTTGGTTTGATGATGAATGTCTCAGAAAAGAACTAAAGAGACTTTCTAACAAAAAGCACAAAGATCCATCCAGCCAGACATTACAGCTTACTTATTCTGACTGTCTGAAAAATTACAAGAGACTATTGTGGAACAAAAGAGAAAATTATTATAAAACCAAAATTGATGAAATCGACGAATCAGACCAAAACACTTTCTGGAAGCTATGTAAAAAACTCGAAAAACCCAAATCAGAAATATCTCTACAGAGTGGCACAATTTGGAAATCTTACTTTGAAAACCTTTATTAAAAAATTGAAATTACTGACCTTAACCAGCCTCAGTGTAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU467088 lncRNA upstream 32455 6392080 ~ 6392356 (+) False G406494
TU467090 lncRNA upstream 32455 6392148 ~ 6392356 (+) True G406494
TU467074 lncRNA upstream 101188 6323185 ~ 6323623 (+) True G406480
TU466743 lncRNA upstream 113112 6310408 ~ 6311699 (+) True G406172
TU466710 lncRNA upstream 138385 6279419 ~ 6286426 (+) True G406142
TU467131 lncRNA downstream 115529 6546125 ~ 6546203 (+) True G406532
TU467132 lncRNA downstream 115529 6541262 ~ 6541985 (+) False CI01000299_06541306_06541820
TU467133 lncRNA downstream 115529 6546082 ~ 6546203 (+) True G406532
CI01000299_06416707_06422267.mRNA mRNA upstream 2163 6416707 ~ 6422648 (+) True CI01000299_06416707_06422267
CI01000299_06396938_06400105.mRNA mRNA upstream 23469 6396938 ~ 6401342 (+) True CI01000299_06396938_06400105
CI01000299_06322253_06326504.mRNA mRNA upstream 98249 6322253 ~ 6326562 (+) True CI01000299_06322253_06326504
CI01000299_06312445_06318421.mRNA mRNA upstream 106390 6312040 ~ 6318421 (+) True CI01000299_06312445_06318421
CI01000299_06269853_06274289.mRNA mRNA upstream 150418 6269602 ~ 6274393 (+) True CI01000299_06269853_06274289
CI01000299_06430810_06434834.mRNA mRNA downstream 2318 6428051 ~ 6435178 (+) True CI01000299_06430810_06434834
CI01000299_06439603_06455258.mRNA mRNA downstream 13870 6439603 ~ 6455462 (+) True CI01000299_06439603_06455258
CI01000299_06458969_06464458.mRNA mRNA downstream 32342 6458075 ~ 6464695 (+) True CI01000299_06458969_06464458
CI01000299_06466541_06475063.mRNA mRNA downstream 40808 6466541 ~ 6475639 (+) True CI01000299_06466541_06475063
CI01000299_06532144_06534604.mRNA mRNA downstream 106411 6532144 ~ 6534631 (+) True CI01000299_06532144_06534604
TU466732 other upstream 124303 6237838 ~ 6300508 (+) True G406161
TU466818 other upstream 1051232 5371181 ~ 5373579 (+) True G406244
TU466651 other upstream 1496967 4924462 ~ 4927844 (+) True G406096
TU466374 other upstream 1720186 4702382 ~ 4702508 (+) True G405864
TU466383 other upstream 1918894 4505404 ~ 4505917 (+) True G405866

Expression Profile