RNA id: TU468694


Basic Information

Item Value
RNA id TU468694
length 520
RNA type TUCP
GC content 0.55
exon number 5
gene id G407899
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6532144 ~ 6534655 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAGGTTGACCGCAAAACTTTTATTAACGCACAAAACACCAAAACATGAGCTTAACGCTTGCCACCGACGCGAGGGGCGCTGACCTTCATGGGCTTGGCAATCTTCTGTTTTGGTGCAGCTTTAGCAGGGGCCTTGGTGCTCTGGGCGGACGGCTTCTTAGTCGCCTGCTTTGCCTTCTTGGCCTCCTTGGCAGCCCTGATGGCTTGCTCTCTCTGCGCTTTACGCACTTCAGGCTTCTGGTTCCTCTTGGCCAGGATCTCAGCCAGAGACGCGCCGGTAATCGCCCGCTGGAACTTCACCGCGCGCCGCGTGCGCTTCTTAGACACCTCTTCAGACTGGCCCTTCTTGTGTTTGCGCCGGTACAGAACGGTCCAGTTGATCTGTCTGGGGTTCCTCTTGGACAGGAACGCAGACTCACATTTAGCATTCAAGAACTGGAAAACCTTTCCATCGATCCTGGCGTACCGCCGGCCATGACCGGGATAGATTTTATATCCACTAAAACTGCACAGCTCGACCTTCATGGCGGCGTTTCA

Function

GO: NA

KEGG:

id description
K16717 CEP97; centrosomal protein CEP97

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU468822 lncRNA downstream 39983 6491757 ~ 6492018 (-) True G408023
TU468821 lncRNA downstream 40489 6491187 ~ 6491512 (-) True G408022
TU468820 lncRNA downstream 42297 6489437 ~ 6489704 (-) True G408021
TU468719 lncRNA downstream 66816 6462457 ~ 6465185 (-) True G407924
TU468732 lncRNA downstream 72881 6458779 ~ 6459120 (-) True G407937
TU468829 lncRNA upstream 6630 6541285 ~ 6546201 (-) True G408028
CI01000299_06522084_06525262.mRNA mRNA downstream 6739 6521968 ~ 6525262 (-) True CI01000299_06522084_06525262
CI01000299_06516832_06521405.mRNA mRNA downstream 10596 6516595 ~ 6521405 (-) True CI01000299_06516832_06521405
CI01000299_06505676_06510021.mRNA mRNA downstream 21857 6505557 ~ 6510144 (-) True CI01000299_06505676_06510021
CI01000299_06497414_06502931.mRNA mRNA downstream 29070 6497156 ~ 6502931 (-) True CI01000299_06497414_06502931
CI01000299_06476844_06477950.mRNA mRNA downstream 52452 6475983 ~ 6479549 (-) True CI01000299_06476844_06477950
TU468578 other downstream 607868 5923656 ~ 5924133 (-) True CI01000299_05919510_05924061
TU468584 other downstream 696012 5835889 ~ 5835989 (-) True G407805
TU468421 other downstream 1075893 5455914 ~ 5456108 (-) True G407665
TU468235 other downstream 1603183 4925968 ~ 4928818 (-) True G407509
TU468104 other downstream 1981280 4475994 ~ 4550721 (-) True G407413

Expression Profile


Homologous

species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00001413 False 1018 mRNA 0.51 6 NC_007112.7 6408 ~ 12027 (-)