RNA id: TU467132


Basic Information

Item Value
RNA id TU467132
length 473
lncRNA type sense_over
GC content 0.39
exon number 3
gene id CI01000299_06541306_06541820
representative False

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6541262 ~ 6541985 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAGAAAGTTGCACCTGTTTGGTTAATTTTGCATTTGTTCAACAGTTTGTGAAAACCATCCTGTCACAAGGTCACCTGACGCCGCTCCCGCTCTACGTGTGTCCAGTGTACTGGGCGTATGATTACGCCTTACGCGTTTATCCTGTGCCTGATGTCATTGTCTTCGCTGACAAATACGACCCCTTCAACATATCCAACACAGACTGCCTGTGCATCAACCCGGGTTCTTTTCCAAAAAGTGGATTCTCCTTTAAAGTTTATTATCCGTCCAACAGAACAGTGGAGGACAGCAAATTACAAGGGCTTTAAACCAGAAGAAACCGTGGAAAATCAGACAGATGTGCTTCATGTTTTTAATTTTGTTGTTGTTATTTCCATTGTAGTCTTTAAAATGTAGATTTCTTTTACATCAATTTCATATGGTTATTGTTTGATTTTGATTGTTGATGCACTTTTAAAGTAAAATAAATATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467088 lncRNA upstream 148906 6392080 ~ 6392356 (+) False G406494
TU467090 lncRNA upstream 148906 6392148 ~ 6392356 (+) True G406494
TU467074 lncRNA upstream 217639 6323185 ~ 6323623 (+) True G406480
TU466743 lncRNA upstream 229563 6310408 ~ 6311699 (+) True G406172
TU466710 lncRNA upstream 254836 6279419 ~ 6286426 (+) True G406142
CI01000299_06532144_06534604.mRNA mRNA upstream 6631 6532144 ~ 6534631 (+) True CI01000299_06532144_06534604
CI01000299_06466541_06475063.mRNA mRNA upstream 65623 6466541 ~ 6475639 (+) True CI01000299_06466541_06475063
CI01000299_06458969_06464458.mRNA mRNA upstream 76567 6458075 ~ 6464695 (+) True CI01000299_06458969_06464458
CI01000299_06439603_06455258.mRNA mRNA upstream 85800 6439603 ~ 6455462 (+) True CI01000299_06439603_06455258
CI01000299_06430810_06434834.mRNA mRNA upstream 106084 6428051 ~ 6435178 (+) True CI01000299_06430810_06434834
CI01000299_06556313_06564020.mRNA mRNA downstream 14328 6556313 ~ 6564237 (+) True CI01000299_06556313_06564020
TU466732 other upstream 240754 6237838 ~ 6300508 (+) True G406161
TU466818 other upstream 1167683 5371181 ~ 5373579 (+) True G406244
TU466651 other upstream 1613418 4924462 ~ 4927844 (+) True G406096
TU466374 other upstream 1836637 4702382 ~ 4702508 (+) True G405864
TU466383 other upstream 2035345 4505404 ~ 4505917 (+) True G405866

Expression Profile