RNA id: CI01000299_06556313_06564020.mRNA


Basic Information

Item Value
RNA id CI01000299_06556313_06564020.mRNA
length 1096
RNA type mRNA
GC content 0.48
exon number 4
gene id CI01000299_06556313_06564020
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6556313 ~ 6564237 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTGTGAGAATGGAGCATCTGTCAGAAGCGCAGGCACAGTTTGCCCTCAATCTGTTCCAGAAAATCAGTGAGGGAAACATGTCAGGAAATGTCTTTTATTCTCCTCTCAGCATCTCTGCTGCTCTTTCTATGCTGTCTCTCGGAGCAGGAGGAAACACGGCGTCTCAGATCACCCGGAAGATCAAGGACCTGTTGGCAGAAGGGTATTTGGATTCTGAGACTAAACTGGTGCTGGTGAACGCCATCTACTTCAAGGGCAACTGGGAGAGGAAGTTCACAAAGGAAGAGACCCGAGAAGAGCAGTTCAAGCTGAACAAGAATGAATCGAAGCCAGTGCGGATGATGATCCAGGAGGCCGAGTTTCCTCTGGCCTTCATTCCTGACGTGAACTGTCAGATTCTCGAGCTGCCGTATGTGGGGAAAGAGCTCAGTATGCTGATCATGCTTCCCAACGCCATGGAGGACGACACCACCGGCCTTCAGAAGCTGGAGAGCGCGCTGACCTACGAGAACTTCATGGAGTGGACCCGACCTGACATGATGGATCTACTGGAAGTCGAAGTGGCTCTGCCCAGATTCAGGATGGAGGAAACCTATAACATGAATGATCTTCTGATCAGCCTGGGAATGGTGGATGCGTTTGACTCGCAGAAAGCCAATTTTTCAGGAATGTCCCCTAGCAACGATCTGGTGCTGTCTAAGGTGGTGCATAAGTCCATTGTTGAAGTGAATGAAGAGGGGACAGAGGCAGCTGCAGCCACCGGTGCTGTCGTGGACAGCTTACCGAATCGCTTTTACGCCAATCACCCTTTCCTCTTCTTCATACGCCACAATCCCTCTAAGAGCATTCTATTCTATGGACGTGTCTGCTCTCCTTGAGATCCCAACATAGATGTGACAACTTGCTGATGGGTTTGATCGGTTTAGAACAAATCATAATACTGGTAGATGAGGGATCAGGGTTCTGGTCTGTGCACTACATGTGTTGAAATGTCCTTTTGCCTTAATTCCCGAGTGCCTGTGTTGTTTCTTCTACTGAATATTCTGGAGTGAAATTGTTTATGCATTTACTCTAAAGGTGCTTGCAACATTATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467131 lncRNA upstream 10110 6546125 ~ 6546203 (+) True G406532
TU467133 lncRNA upstream 10110 6546082 ~ 6546203 (+) True G406532
TU467132 lncRNA upstream 14328 6541262 ~ 6541985 (+) False CI01000299_06541306_06541820
TU467088 lncRNA upstream 163957 6392080 ~ 6392356 (+) False G406494
TU467090 lncRNA upstream 163957 6392148 ~ 6392356 (+) True G406494
CI01000299_06541306_06541820.mRNA mRNA upstream 14338 6541306 ~ 6541975 (+) False CI01000299_06541306_06541820
CI01000299_06532144_06534604.mRNA mRNA upstream 21682 6532144 ~ 6534631 (+) True CI01000299_06532144_06534604
CI01000299_06466541_06475063.mRNA mRNA upstream 80674 6466541 ~ 6475639 (+) True CI01000299_06466541_06475063
CI01000299_06458969_06464458.mRNA mRNA upstream 91618 6458075 ~ 6464695 (+) True CI01000299_06458969_06464458
CI01000299_06439603_06455258.mRNA mRNA upstream 100851 6439603 ~ 6455462 (+) True CI01000299_06439603_06455258
TU466732 other upstream 255805 6237838 ~ 6300508 (+) True G406161
TU466818 other upstream 1182734 5371181 ~ 5373579 (+) True G406244
TU466651 other upstream 1628469 4924462 ~ 4927844 (+) True G406096
TU466374 other upstream 1851688 4702382 ~ 4702508 (+) True G405864
TU466383 other upstream 2050396 4505404 ~ 4505917 (+) True G405866

Expression Profile