RNA id: TU464259



Basic Information


Item Value
RNA id TU464259
length 201
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G403867
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 467150 ~ 467350 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAGAACATGTAGCGCGCCTCCCATTGAATAAATCACAATAATCTTTGTGCTTTGTTACTTTTGATATGAAGCAAAGTCTCAGATTTCAAATGACGTCCATCTTATTATGAGATTCAAAAAATAAATACCATTTTGGCGCTGTTTAATGTGACGTGACAGATCGCTTTAGTGCCTCGGTTAAAGAGAAGCGGCAGCACGGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU464258 lncRNA downstream 215 466674 ~ 466935 (-) True G403866
TU464230 lncRNA downstream 20671 444789 ~ 446479 (-) True G403838
TU464233 lncRNA downstream 28364 438309 ~ 438786 (-) True G403841
TU464232 lncRNA downstream 33561 433359 ~ 433589 (-) True G403840
TU464250 lncRNA downstream 37185 429635 ~ 429965 (-) True G403858
TU464267 lncRNA upstream 10620 477970 ~ 478252 (-) True G403874
TU464268 lncRNA upstream 11194 478544 ~ 479150 (-) True G403875
TU464307 lncRNA upstream 58171 525521 ~ 525854 (-) True G403913
TU464571 lncRNA upstream 88094 555444 ~ 555651 (-) True G404161
TU464572 lncRNA upstream 88503 555853 ~ 556063 (-) True G404162
CI01000299_00452374_00452868.mRNA mRNA downstream 14282 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00448948_00449565.mRNA mRNA downstream 17393 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00185106_00209299.mRNA mRNA downstream 257851 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 296164 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00670925_00672195.mRNA mRNA upstream 203330 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 535969 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 590470 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
CI01000299_01114487_01122666.mRNA mRNA upstream 646400 1113750 ~ 1124230 (-) True CI01000299_01114487_01122666
CI01000299_01222994_01268707.mRNA mRNA upstream 755509 1222859 ~ 1270326 (-) True CI01000299_01222994_01268707
TU464604 other upstream 203484 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 603257 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1192305 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1388289 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1550337 2017687 ~ 2018050 (-) True G405053

Expression Profile