RNA id: TU464307


Basic Information

Item Value
RNA id TU464307
length 334
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G403913
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 525521 ~ 525854 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAAAAAATGAAGAATGCTTTCTTTATGTTTTTAGTTCACACATGATGACATAAAAGCGTTCACACAAATTGCTACATTATTCTCTAATTCAACAATCCGGAGTCAATTATTCCACTTATACTATGGTTACCACACTTCAAGACACTGTGTGTCAAGACAGATGTTGCATTTCAAGACATTTGTCAGGTGTGTGGGACTAATTTCTTACGCATCTCATCCCAAGCCTCCATTGCTAATTCCAAAACGTCATTTCAGAACTAGTAATGGAGGCTTAAGCCTTGATAGCAGAGTAATACAGTTGATACAGTTATTAACGCAGTTGAGAGAGAGAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU464268 lncRNA downstream 46371 478544 ~ 479150 (-) True G403875
TU464267 lncRNA downstream 47269 477970 ~ 478252 (-) True G403874
TU464259 lncRNA downstream 58171 467150 ~ 467350 (-) True G403867
TU464258 lncRNA downstream 58586 466674 ~ 466935 (-) True G403866
TU464230 lncRNA downstream 79042 444789 ~ 446479 (-) True G403838
TU464571 lncRNA upstream 29590 555444 ~ 555651 (-) True G404161
TU464572 lncRNA upstream 29999 555853 ~ 556063 (-) True G404162
TU464576 lncRNA upstream 60292 586146 ~ 586347 (-) True G404166
TU464578 lncRNA upstream 70714 596568 ~ 601001 (-) True G404168
TU464580 lncRNA upstream 79219 605073 ~ 605582 (-) True G404169
CI01000299_00452374_00452868.mRNA mRNA downstream 72653 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_00448948_00449565.mRNA mRNA downstream 75764 448863 ~ 449757 (-) True CI01000299_00448948_00449565
CI01000299_00185106_00209299.mRNA mRNA downstream 316222 184774 ~ 209299 (-) True CI01000299_00185106_00209299
CI01000299_00169255_00170695.mRNA mRNA downstream 354535 169223 ~ 170986 (-) True CI01000299_00169255_00170695
CI01000299_00670925_00672195.mRNA mRNA upstream 144826 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_01003547_01034507.mRNA mRNA upstream 477465 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_01057889_01063623.mRNA mRNA upstream 531966 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
CI01000299_01114487_01122666.mRNA mRNA upstream 587896 1113750 ~ 1124230 (-) True CI01000299_01114487_01122666
CI01000299_01222994_01268707.mRNA mRNA upstream 697005 1222859 ~ 1270326 (-) True CI01000299_01222994_01268707
TU464604 other upstream 144980 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU464792 other upstream 544753 1070607 ~ 1075891 (-) True G404372
TU465225 other upstream 1133801 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 1329785 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 1491833 2017687 ~ 2018050 (-) True G405053

Expression Profile