RNA id: TU464925



Basic Information


Item Value
RNA id TU464925
length 224
lncRNA type intronic
GC content 0.56
exon number 1
gene id G404493
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 1211707 ~ 1211930 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CACGGGCCAGCCTTCGCTCCCCACGTGCATCAGTGAGCCTTGGCCGCCCATGACCCTGTCGCCGGTTCACCACTGTTCCTTCCTTGGACCACTTTTGATAGATACTGACCACTGCAGACCGGGAACACCCCACAAGAGCTGCAGTTTTGGAGATGCTCTGACTCAGTCGTCTAGCCATCACAATTTGGTCCTTGTCAAACTCGCTCAAATCCTTACGCTTGCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU464918 lncRNA downstream 11036 1199357 ~ 1200671 (-) True G404486
TU464916 lncRNA downstream 13466 1197441 ~ 1198241 (-) True G404484
TU464878 lncRNA downstream 63980 1147456 ~ 1147727 (-) True G404457
TU464800 lncRNA downstream 80445 1131043 ~ 1131262 (-) True G404380
TU464713 lncRNA downstream 84274 1125736 ~ 1127433 (-) True G404293
TU464973 lncRNA upstream 97624 1309554 ~ 1309772 (-) True G404541
TU465037 lncRNA upstream 191984 1403914 ~ 1404355 (-) True G404604
TU465103 lncRNA upstream 254911 1466841 ~ 1500623 (-) True G404669
TU465212 lncRNA upstream 392370 1604300 ~ 1604628 (-) True G404771
TU465213 lncRNA upstream 392780 1604710 ~ 1605108 (-) True G404772
CI01000299_01114487_01122666.mRNA mRNA downstream 87477 1113750 ~ 1124230 (-) True CI01000299_01114487_01122666
CI01000299_01057889_01063623.mRNA mRNA downstream 148084 1057820 ~ 1063623 (-) True CI01000299_01057889_01063623
CI01000299_01003547_01034507.mRNA mRNA downstream 176895 1003319 ~ 1034812 (-) True CI01000299_01003547_01034507
CI01000299_00670925_00672195.mRNA mRNA downstream 538082 670680 ~ 673625 (-) False CI01000299_00670925_00672195
CI01000299_00452374_00452868.mRNA mRNA downstream 758839 451341 ~ 452868 (-) True CI01000299_00452374_00452868
CI01000299_01222994_01268707.mRNA mRNA upstream 10929 1222859 ~ 1270326 (-) True CI01000299_01222994_01268707
CI01000299_01338052_01368900.mRNA mRNA upstream 125942 1337872 ~ 1369376 (-) True CI01000299_01338052_01368900
CI01000299_01419938_01421048.mRNA mRNA upstream 207599 1419529 ~ 1421048 (-) True CI01000299_01419938_01421048
CI01000299_01693958_01696561.mRNA mRNA upstream 480994 1692924 ~ 1697305 (-) True CI01000299_01693958_01696561
CI01000299_02670695_02682116.mRNA mRNA upstream 1458666 2670596 ~ 2682116 (-) True CI01000299_02670695_02682116
TU464792 other downstream 135816 1070607 ~ 1075891 (-) True G404372
TU464604 other downstream 538851 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU465225 other upstream 447725 1659655 ~ 1660000 (-) True G404784
TU465428 other upstream 643709 1855639 ~ 1880988 (-) True G404976
TU465509 other upstream 805757 2017687 ~ 2018050 (-) True G405053
TU467961 other upstream 2929188 4163313 ~ 4164324 (-) True CI01000299_04158468_04164223
TU468104 other upstream 3264064 4475994 ~ 4550721 (-) True G407413

Expression Profile