RNA id: TU467410



Basic Information


Item Value
RNA id TU467410
length 239
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G406779
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2829217 ~ 2829455 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GAAAAACATTGCCTGGTCTGATGAGTCTTGATTTCTGCTGCAACATTCAGATGGTAGGGTCAGAATTTGGTGTAAACAACATGAAAGCATGGATCCATCCTGCCTTGTATCAACGGTTCAAGCTGCTGCTGGTGGTGTAATGGTGTGTGGGATGTTTTCTTGGCACACTTTGGGCCTCTTACTACCAATTGAGCATCGTTTAAATGCCACAGCCAACCTGAGTATTGTTGCTGACCATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU467401 lncRNA downstream 108669 2720213 ~ 2720548 (-) True G406772
TU467243 lncRNA downstream 122525 2705521 ~ 2706692 (-) True G406630
TU467344 lncRNA downstream 297209 2531792 ~ 2532008 (-) True G406715
TU467152 lncRNA downstream 733861 2095043 ~ 2095356 (-) True G406551
TU467140 lncRNA downstream 771331 2057670 ~ 2057886 (-) True G406539
TU467418 lncRNA upstream 91855 2921310 ~ 2922385 (-) True G406786
TU467422 lncRNA upstream 99885 2929340 ~ 2929549 (-) True G406790
TU467475 lncRNA upstream 228251 3057706 ~ 3058006 (-) True G406842
TU467504 lncRNA upstream 291542 3120997 ~ 3121253 (-) True G406868
TU467520 lncRNA upstream 325145 3154600 ~ 3155118 (-) True G406884
CI01000299_02761916_02788258.mRNA mRNA downstream 40780 2761414 ~ 2788437 (-) True CI01000299_02761916_02788258
CI01000299_02723315_02728716.mRNA mRNA downstream 100464 2723220 ~ 2728753 (-) True CI01000299_02723315_02728716
CI01000299_02670695_02682116.mRNA mRNA downstream 147101 2670596 ~ 2682116 (-) True CI01000299_02670695_02682116
CI01000299_01693958_01696561.mRNA mRNA downstream 1131912 1692924 ~ 1697305 (-) True CI01000299_01693958_01696561
CI01000299_01419938_01421048.mRNA mRNA downstream 1408169 1419529 ~ 1421048 (-) True CI01000299_01419938_01421048
CI01000299_02833341_02845817.mRNA mRNA upstream 3635 2833090 ~ 2845870 (-) True CI01000299_02833341_02845817
CI01000299_02850281_02876863.mRNA mRNA upstream 20826 2850281 ~ 2876863 (-) True CI01000299_02850281_02876863
CI01000299_02891830_02905146.mRNA mRNA upstream 62119 2891574 ~ 2905146 (-) True CI01000299_02891830_02905146
CI01000299_02951402_03057288.mRNA mRNA upstream 121947 2951402 ~ 3057288 (-) True CI01000299_02951402_03057288
CI01000299_03104921_03106385.mRNA mRNA upstream 275150 3104605 ~ 3106385 (-) True CI01000299_03104921_03106385
TU465509 other downstream 811167 2017687 ~ 2018050 (-) True G405053
TU465428 other downstream 948229 1855639 ~ 1880988 (-) True G404976
TU465225 other downstream 1169217 1659655 ~ 1660000 (-) True G404784
TU464792 other downstream 1753326 1070607 ~ 1075891 (-) True G404372
TU464604 other downstream 2156361 670834 ~ 672856 (-) True CI01000299_00670925_00672195
TU467961 other upstream 1311663 4163313 ~ 4164324 (-) True CI01000299_04158468_04164223
TU468104 other upstream 1646539 4475994 ~ 4550721 (-) True G407413
TU468235 other upstream 2096513 4925968 ~ 4928818 (-) True G407509
TU468421 other upstream 2611882 5455914 ~ 5456108 (-) True G407665
TU468578 other upstream 2989114 5923656 ~ 5924133 (-) True CI01000299_05919510_05924061

Expression Profile