RNA id: TU468017



Basic Information


Item Value
RNA id TU468017
length 224
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G407344
representative True

Chromosome Information


Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 4267219 ~ 4267442 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGAATAGCCCCTGAACCGCTGGCCCCCACCCACGGTGTTTTCTAATAGGATTACCAATCACTTAGCTCCTATATTTGCATCCTTTAGTCCTATTCAGGGTCACTGGCCTAGCTCTTCCGCTGTTCTTTGATCAGTGGTGCACGTTCGCCTTTGGTCAACGAGGGCACAAACCGAGACAACCCAAATTTGTGCCGGCGATGCAGCAAGCTTTTCCTGTCCTCAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU468016 lncRNA downstream 666 4266354 ~ 4266553 (-) True G407343
TU468013 lncRNA downstream 3758 4259482 ~ 4263461 (-) True G407340
TU468003 lncRNA downstream 59065 4207797 ~ 4208154 (-) True G407330
TU467968 lncRNA downstream 87592 4156825 ~ 4179627 (-) True G407296
TU467991 lncRNA downstream 137999 4129003 ~ 4129220 (-) True G407318
TU468021 lncRNA upstream 4470 4271912 ~ 4272172 (-) True G407348
TU468025 lncRNA upstream 13722 4281164 ~ 4281377 (-) True G407352
TU468070 lncRNA upstream 82081 4349523 ~ 4349764 (-) True G407387
TU468080 lncRNA upstream 94565 4362007 ~ 4362238 (-) True G407397
TU468042 lncRNA upstream 125962 4393404 ~ 4397008 (-) True CI01000299_04398464_04403711
CI01000299_04242809_04251680.mRNA mRNA downstream 15354 4242197 ~ 4251865 (-) True CI01000299_04242809_04251680
CI01000299_04227918_04239792.mRNA mRNA downstream 27427 4227520 ~ 4239792 (-) True CI01000299_04227918_04239792
CI01000299_04186183_04196219.mRNA mRNA downstream 69335 4184967 ~ 4197884 (-) True CI01000299_04186183_04196219
CI01000299_04171373_04175441.mRNA mRNA downstream 91778 4171149 ~ 4175441 (-) True CI01000299_04171373_04175441
CI01000299_04158468_04164223.mRNA mRNA downstream 102504 4158001 ~ 4164715 (-) False CI01000299_04158468_04164223
CI01000299_04370401_04385955.mRNA mRNA upstream 102959 4370401 ~ 4388020 (-) True CI01000299_04370401_04385955
CI01000299_04398464_04403711.mRNA mRNA upstream 129032 4396474 ~ 4403711 (-) False CI01000299_04398464_04403711
CI01000299_04456420_04468754.mRNA mRNA upstream 188787 4456229 ~ 4469450 (-) False CI01000299_04456420_04468754
CI01000299_04587880_04594059.mRNA mRNA upstream 320352 4587794 ~ 4594120 (-) True CI01000299_04587880_04594059
CI01000299_04603421_04609353.mRNA mRNA upstream 335949 4603391 ~ 4609353 (-) True CI01000299_04603421_04609353
TU467961 other downstream 102895 4163313 ~ 4164324 (-) True CI01000299_04158468_04164223
TU465509 other downstream 2249169 2017687 ~ 2018050 (-) True G405053
TU465428 other downstream 2386231 1855639 ~ 1880988 (-) True G404976
TU465225 other downstream 2607219 1659655 ~ 1660000 (-) True G404784
TU464792 other downstream 3191328 1070607 ~ 1075891 (-) True G404372
TU468104 other upstream 208552 4475994 ~ 4550721 (-) True G407413
TU468235 other upstream 658526 4925968 ~ 4928818 (-) True G407509
TU468421 other upstream 1173895 5455914 ~ 5456108 (-) True G407665
TU468578 other upstream 1551127 5923656 ~ 5924133 (-) True CI01000299_05919510_05924061
TU468584 other upstream 1560394 5835889 ~ 5835989 (-) True G407805

Expression Profile