RNA id: TU467064


Basic Information

Item Value
RNA id TU467064
length 338
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G406470
representative True

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6183194 ~ 6183531 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACTGTTGGCCAGAGGAGAACTGGCCCCCCGACTAAGCCTGGTTTCTCCCAAGGTTTTTTTCTCCATTTTAACACCAATTTGCCACTTGTCTGCCACCTGATGTCACCTGATGGAGTTTGGGTTCCTTGCCGCTGTCGCCTTTGGCTTGCTTAGTTGGGGACACTTGACATTTGACTTGACATTTGATATTCAACAGTGCTTTGATCTGCCTGCATTGACACTATTCTTTAAGAGCTGCTGTGCAGCCAAACAATGTACCAGTTATCAATGTAAAGCTGCTTTGACACAATCTACATTGTAAAAAGCGCTATATAAATAAAGGTGACTTGACTTGACTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467055 lncRNA upstream 32072 6149599 ~ 6151122 (+) True G406461
TU467057 lncRNA upstream 47073 6135889 ~ 6136121 (+) True G406463
TU467052 lncRNA upstream 49151 6133843 ~ 6134043 (+) True G406458
TU466791 lncRNA upstream 157837 6025051 ~ 6025357 (+) True G406220
TU466784 lncRNA upstream 167547 6013408 ~ 6015647 (+) True G406213
TU466733 lncRNA downstream 6248 6189779 ~ 6197674 (+) True G406162
TU467072 lncRNA downstream 23303 6206834 ~ 6207044 (+) True G406478
TU466767 lncRNA downstream 82223 6265754 ~ 6266230 (+) True G406196
TU466709 lncRNA downstream 95888 6279419 ~ 6286426 (+) False G406142
TU466710 lncRNA downstream 95888 6279419 ~ 6286426 (+) True G406142
CI01000299_06177821_06180061.mRNA mRNA upstream 3003 6177821 ~ 6180191 (+) True CI01000299_06177821_06180061
CI01000299_06116505_06128180.mRNA mRNA upstream 54744 6115638 ~ 6128450 (+) True CI01000299_06116505_06128180
CI01000299_06100005_06114087.mRNA mRNA upstream 68731 6099717 ~ 6114463 (+) True CI01000299_06100005_06114087
CI01000299_06074050_06097303.mRNA mRNA upstream 85661 6074050 ~ 6097533 (+) True CI01000299_06074050_06097303
CI01000299_06029307_06034445.mRNA mRNA upstream 148238 6028957 ~ 6034956 (+) True CI01000299_06029307_06034445
CI01000299_06217616_06220842.mRNA mRNA downstream 34085 6217616 ~ 6221071 (+) True CI01000299_06217616_06220842
CI01000299_06223295_06227054.mRNA mRNA downstream 39361 6222892 ~ 6227186 (+) True CI01000299_06223295_06227054
CI01000299_06233485_06239858.mRNA mRNA downstream 49041 6232572 ~ 6239902 (+) True CI01000299_06233485_06239858
CI01000299_06269853_06274289.mRNA mRNA downstream 86071 6269602 ~ 6274393 (+) True CI01000299_06269853_06274289
CI01000299_06312445_06318421.mRNA mRNA downstream 128509 6312040 ~ 6318421 (+) True CI01000299_06312445_06318421
TU466818 other upstream 809615 5371181 ~ 5373579 (+) True G406244
TU466651 other upstream 1255350 4924462 ~ 4927844 (+) True G406096
TU466374 other upstream 1478569 4702382 ~ 4702508 (+) True G405864
TU466383 other upstream 1677277 4505404 ~ 4505917 (+) True G405866
TU466350 other upstream 1863053 4295533 ~ 4320141 (+) True G405842
TU466732 other downstream 54307 6237838 ~ 6300508 (+) True G406161

Expression Profile