Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001553 |
| length | 914 |
| lncRNA type | retained_intron |
| GC content | 0.42 |
| exon number | 2 |
| gene id | XLOC_000979 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 7662091 ~ 7673376 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0008150 | biological_process | biological_process |
| GO:0005654 | nucleoplasm | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-736 | Predicted to be active in mitochondrion and nucleoplasm. Is expressed in brain. Orthologous to human ARGLU1 (arginine and glutamate rich 1). |
| ensembl_id | ENSDART00000152542 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00002907 | lncRNA | downstream | 2881 | 7659201 ~ 7659757 (-) | True | XLOC_000978 |
| TCONS_00001551 | lncRNA | downstream | 24958 | 7634813 ~ 7637680 (-) | False | XLOC_000978 |
| TCONS_00001548 | lncRNA | downstream | 80651 | 7581169 ~ 7581987 (-) | True | XLOC_000977 |
| TCONS_00002906 | lncRNA | downstream | 108299 | 7545049 ~ 7554339 (-) | True | XLOC_000975 |
| TCONS_00003324 | lncRNA | downstream | 108475 | 7545049 ~ 7554163 (-) | False | XLOC_000975 |
| TCONS_00001554 | lncRNA | upstream | 31468 | 7700023 ~ 7701856 (-) | True | XLOC_000980 |
| TCONS_00001555 | lncRNA | upstream | 103002 | 7771557 ~ 7844362 (-) | True | XLOC_000981 |
| TCONS_00002910 | lncRNA | upstream | 246925 | 7915480 ~ 7920626 (-) | False | XLOC_000984 |
| TCONS_00002913 | lncRNA | upstream | 246925 | 7915480 ~ 7920627 (-) | False | XLOC_000984 |
| TCONS_00002911 | lncRNA | upstream | 246925 | 7915480 ~ 7920628 (-) | False | XLOC_000984 |
| TCONS_00001550 | mRNA | downstream | 2768 | 7634458 ~ 7659870 (-) | False | XLOC_000978 |
| TCONS_00001546 | mRNA | downstream | 58904 | 7574351 ~ 7603734 (-) | False | XLOC_000977 |
| TCONS_00001547 | mRNA | downstream | 79779 | 7574447 ~ 7582859 (-) | False | XLOC_000977 |
| TCONS_00001544 | mRNA | downstream | 92457 | 7562316 ~ 7570181 (-) | True | XLOC_000976 |
| TCONS_00001541 | mRNA | downstream | 1168254 | 6403551 ~ 6494384 (-) | True | XLOC_000972 |
| TCONS_00001557 | mRNA | upstream | 179232 | 7847787 ~ 7894255 (-) | False | XLOC_000983 |
| TCONS_00001558 | mRNA | upstream | 179265 | 7847820 ~ 7893808 (-) | False | XLOC_000983 |
| TCONS_00001559 | mRNA | upstream | 220555 | 7889110 ~ 7894255 (-) | True | XLOC_000983 |
| TCONS_00001560 | mRNA | upstream | 239727 | 7908282 ~ 7912932 (-) | False | XLOC_000984 |
| TCONS_00001561 | mRNA | upstream | 239727 | 7908282 ~ 7917062 (-) | False | XLOC_000984 |
| TCONS_00001549 | other | downstream | 12566 | 7632119 ~ 7650072 (-) | False | XLOC_000978 |
| TCONS_00001545 | other | downstream | 59065 | 7574351 ~ 7603573 (-) | False | XLOC_000977 |
| TCONS_00001543 | other | downstream | 520495 | 7142039 ~ 7142143 (-) | True | XLOC_000974 |
| TCONS_00001542 | other | downstream | 1209119 | 6453404 ~ 6453519 (-) | True | XLOC_000973 |
| TCONS_00001538 | other | downstream | 1440389 | 6220881 ~ 6222249 (-) | False | XLOC_000970 |
| TCONS_00001556 | other | upstream | 132976 | 7801531 ~ 7801646 (-) | True | XLOC_000982 |
| TCONS_00001562 | other | upstream | 250240 | 7918795 ~ 7918882 (-) | False | XLOC_000984 |
| TCONS_00001563 | other | upstream | 250925 | 7919480 ~ 7919567 (-) | True | XLOC_000984 |
| TCONS_00001564 | other | upstream | 251564 | 7920119 ~ 7920206 (-) | True | XLOC_000985 |
| TCONS_00001570 | other | upstream | 301851 | 7970406 ~ 7975769 (-) | True | XLOC_000989 |
