RNA id: TCONS_00002915



Basic Information


Item Value
RNA id TCONS_00002915
length 281
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id XLOC_000984
representative False

Chromosome Information


Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7908282 ~ 7920702 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CTCTTTGTACGGCGATGTTGGTGTTGTGGGATAAGATGATTCTCTTATCGGAACGGCGCTTTTTGTGTGCAAACATTCCGTCTCATGATGGAGGAAGCGCATGGAAACATGGCCCTGGATGATTTTCGCCATTGTAGTTTGTCCAACATTGAACGCGACGAGCTTTCGCAGTTCTCATTGATAAAAGTGCAGAATTTCTTGAAGGATTTGCTCCATTGTCATTTGTACTTGTTCAACGCTTGCTTATGCATGTCACAAATCAAATTGAACACGAGTTGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00001555 lncRNA downstream 74576 7771557 ~ 7844362 (-) True XLOC_000981
TCONS_00001554 lncRNA downstream 217082 7700023 ~ 7701856 (-) True XLOC_000980
TCONS_00001553 lncRNA downstream 250383 7662638 ~ 7668555 (-) True XLOC_000979
TCONS_00002907 lncRNA downstream 259181 7659201 ~ 7659757 (-) True XLOC_000978
TCONS_00001551 lncRNA downstream 281258 7634813 ~ 7637680 (-) False XLOC_000978
TCONS_00003331 lncRNA upstream 281752 8202390 ~ 8205228 (-) True XLOC_000996
TCONS_00003332 lncRNA upstream 584339 8504977 ~ 8507689 (-) False XLOC_000998
TCONS_00001581 lncRNA upstream 585784 8506422 ~ 8510066 (-) True XLOC_000998
TCONS_00001583 lncRNA upstream 622514 8543152 ~ 8543611 (-) False XLOC_000999
TCONS_00001584 lncRNA upstream 623049 8543687 ~ 8545359 (-) False XLOC_000999
TCONS_00001561 mRNA downstream 1876 7908282 ~ 7917062 (-) False XLOC_000984
TCONS_00001560 mRNA downstream 6006 7908282 ~ 7912932 (-) False XLOC_000984
TCONS_00001557 mRNA downstream 24683 7847787 ~ 7894255 (-) False XLOC_000983
TCONS_00001565 mRNA upstream 4318 7924956 ~ 7930679 (-) True XLOC_000986
TCONS_00001566 mRNA upstream 15632 7936270 ~ 7939514 (-) True XLOC_000987
TCONS_00001567 mRNA upstream 26204 7946842 ~ 7951002 (-) True XLOC_000988
TCONS_00001568 mRNA upstream 43638 7964276 ~ 7970653 (-) False XLOC_000989
TCONS_00001569 mRNA upstream 47454 7968092 ~ 7975755 (-) False XLOC_000989
TCONS_00001562 other downstream 56 7918795 ~ 7918882 (-) False XLOC_000984
TCONS_00001556 other downstream 117292 7801531 ~ 7801646 (-) True XLOC_000982
TCONS_00001549 other downstream 268866 7632119 ~ 7650072 (-) False XLOC_000978
TCONS_00001545 other downstream 315365 7574351 ~ 7603573 (-) False XLOC_000977
TCONS_00001543 other downstream 776795 7142039 ~ 7142143 (-) True XLOC_000974
TCONS_00001570 other upstream 49768 7970406 ~ 7975769 (-) True XLOC_000989
TCONS_00001587 other upstream 632112 8552750 ~ 8553298 (-) True XLOC_000999
TCONS_00001595 other upstream 729471 8650109 ~ 8652655 (-) False XLOC_001004
TCONS_00001610 other upstream 1197462 9118100 ~ 9118671 (-) False XLOC_001012
TCONS_00001617 other upstream 1277221 9197859 ~ 9197966 (-) True XLOC_001018

Expression Profile


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