RNA id: TCONS_00001565


Basic Information

Item Value
RNA id TCONS_00001565
length 1215
RNA type mRNA
GC content 0.39
exon number 7
gene id XLOC_000986
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7924956 ~ 7930679 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCTGAATTCATTTGCTTGCAGTCACACAAGCCAACTGTGTACCAGACAGATTCAAGGGTGAAAAAGATGGGAGGATCAGACTCACAACCAGAAAAACCATAtcaaccaccaccaccaccaccaaatcCAGAACTGGATAAACCATGGAGGCAGTTTGACTGGGGACAAAAAGAAGCCCTAAAAAAATGGCTGGAAAACTTCTCTCCGTGTAATCCAAATGTAAAGAGCATCAAGATCCTGATAGCTGGACAAGCTGGAGCAGGAAAGTCCAGTTTTATTAACTCTATATATTGTGGCTTTCAAGGACGGATATCTTCTAGGGCACTAGTTAACTCAATTGATGGAGACAGTCGCAGTTATACACAAAAGCTCAAAGAATTCACCATCAAAACTGAAAAGAAAACTTTGCCCCTGGTCTTCAGAGACATCATGGGTTTAGAATATGAGGAATTTCATGGATCAAAAACAGAAGATATCATCAAAGCTGTTTTTGGCCATGTGAAAGATGGCTATAAATTCAACGAGGAGCAGTCAATCGATTATAAGGATCAACATTACACCAGTGACCCCAGCCTCTCCGACCAGTGTTTCTGTGTGGTTTACATCATAGATGGAAGTACAGTCCAGTTCACAGATGATCGACTGATTAAAAAGTTGCAGATCATCCGCAAGAGAATCAAAGATAAGGGGATTCCTCAAGTGGTTGTCATGACCAAAGTGGATGAAGCATGTCCTCTggtcaaaaaaaatctaagaaaggtCTACACAAGCAAGAAGATCAAAGAGAAGATGGAGCTGTGTAGTGCCAGCATCGGTGTCCCAATGACAAACATCTTCCCAGTGAAGAACTACCATGATGagattaatactaataatgatgTTGATGTTCTGATACTGAAGGCTCTTGAACAGATTGTTCAGATTGCCAATGACAGATTGGATGATAATGAATCCTACTGAAACAGTCATCTGAGTAGGATAAAATGTAAATAGCTGAGAAAGAAAATAGTGTACGTGACTCAATAGAgggttgtttttgtgtgttttgtcatACATAAACTTTAATTGTTTCAATAATGCATATATTCAGCGTGATCTCAACATTAATAAAAGGTACCTGAAGATATATGTACACTGAATCTTGAAAAAAATGTACATCAAGTGTCATCAACTGTTTTGAAAGTCATGCTGAAATAAATTCATTTGCTACTTGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000146090

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00002909 lncRNA downstream 4254 7915480 ~ 7920702 (-) False XLOC_000984
TCONS_00003330 lncRNA downstream 4256 7915480 ~ 7920700 (-) False XLOC_000984
TCONS_00003329 lncRNA downstream 4256 7915480 ~ 7920700 (-) False XLOC_000984
TCONS_00003328 lncRNA downstream 4256 7915480 ~ 7920700 (-) False XLOC_000984
TCONS_00002912 lncRNA downstream 4256 7915480 ~ 7920700 (-) False XLOC_000984
TCONS_00003331 lncRNA upstream 271711 8202390 ~ 8205228 (-) True XLOC_000996
TCONS_00003332 lncRNA upstream 574298 8504977 ~ 8507689 (-) False XLOC_000998
TCONS_00001581 lncRNA upstream 575743 8506422 ~ 8510066 (-) True XLOC_000998
TCONS_00001583 lncRNA upstream 612473 8543152 ~ 8543611 (-) False XLOC_000999
TCONS_00001584 lncRNA upstream 613008 8543687 ~ 8545359 (-) False XLOC_000999
TCONS_00001561 mRNA downstream 7894 7908282 ~ 7917062 (-) False XLOC_000984
TCONS_00001560 mRNA downstream 12024 7908282 ~ 7912932 (-) False XLOC_000984
TCONS_00001557 mRNA downstream 30701 7847787 ~ 7894255 (-) False XLOC_000983
TCONS_00001559 mRNA downstream 30701 7889110 ~ 7894255 (-) True XLOC_000983
TCONS_00001558 mRNA downstream 31148 7847820 ~ 7893808 (-) False XLOC_000983
TCONS_00001566 mRNA upstream 5591 7936270 ~ 7939514 (-) True XLOC_000987
TCONS_00001567 mRNA upstream 16163 7946842 ~ 7951002 (-) True XLOC_000988
TCONS_00001568 mRNA upstream 33597 7964276 ~ 7970653 (-) False XLOC_000989
TCONS_00001569 mRNA upstream 37413 7968092 ~ 7975755 (-) False XLOC_000989
TCONS_00001571 mRNA upstream 62953 7993632 ~ 7998493 (-) False XLOC_000990
TCONS_00001564 other downstream 4750 7920119 ~ 7920206 (-) True XLOC_000985
TCONS_00001563 other downstream 5389 7919480 ~ 7919567 (-) True XLOC_000984
TCONS_00001562 other downstream 6074 7918795 ~ 7918882 (-) False XLOC_000984
TCONS_00001556 other downstream 123310 7801531 ~ 7801646 (-) True XLOC_000982
TCONS_00001549 other downstream 274884 7632119 ~ 7650072 (-) False XLOC_000978
TCONS_00001570 other upstream 39727 7970406 ~ 7975769 (-) True XLOC_000989
TCONS_00001587 other upstream 622071 8552750 ~ 8553298 (-) True XLOC_000999
TCONS_00001595 other upstream 719430 8650109 ~ 8652655 (-) False XLOC_001004
TCONS_00001610 other upstream 1187421 9118100 ~ 9118671 (-) False XLOC_001012
TCONS_00001617 other upstream 1267180 9197859 ~ 9197966 (-) True XLOC_001018

Expression Profile

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