Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001589 |
| length | 1443 |
| lncRNA type | lincRNA |
| GC content | 0.38 |
| exon number | 2 |
| gene id | XLOC_001002 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 8612575 ~ 8625266 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0008395 | steroid hydroxylase activity | molecular_function |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0008131 | primary amine oxidase activity | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0046906 | tetrapyrrole binding | molecular_function |
| ensembl_id | ENSDART00000192130 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003334 | lncRNA | downstream | 28176 | 8579155 ~ 8587359 (-) | True | XLOC_001001 |
| TCONS_00003333 | lncRNA | downstream | 28178 | 8579155 ~ 8587357 (-) | False | XLOC_001001 |
| TCONS_00001586 | lncRNA | downstream | 62237 | 8550017 ~ 8553298 (-) | False | XLOC_000999 |
| TCONS_00001584 | lncRNA | downstream | 70176 | 8543687 ~ 8545359 (-) | False | XLOC_000999 |
| TCONS_00001583 | lncRNA | downstream | 71924 | 8543152 ~ 8543611 (-) | False | XLOC_000999 |
| TCONS_00003335 | lncRNA | upstream | 4058 | 8622702 ~ 8624882 (-) | True | XLOC_001002 |
| TCONS_00001597 | lncRNA | upstream | 31465 | 8650109 ~ 8652648 (-) | False | XLOC_001004 |
| TCONS_00003336 | lncRNA | upstream | 355856 | 8974500 ~ 8977960 (-) | False | XLOC_001008 |
| TCONS_00001604 | lncRNA | upstream | 355856 | 8974500 ~ 8977963 (-) | True | XLOC_001008 |
| TCONS_00003337 | lncRNA | upstream | 360261 | 8978905 ~ 8980671 (-) | False | XLOC_001009 |
| TCONS_00001588 | mRNA | downstream | 48968 | 8555323 ~ 8566567 (-) | True | XLOC_001000 |
| TCONS_00001582 | mRNA | downstream | 62240 | 8539671 ~ 8553295 (-) | False | XLOC_000999 |
| TCONS_00001585 | mRNA | downstream | 62370 | 8549849 ~ 8553165 (-) | False | XLOC_000999 |
| TCONS_00001579 | mRNA | downstream | 186774 | 8415983 ~ 8428761 (-) | False | XLOC_000997 |
| TCONS_00001591 | mRNA | upstream | 19518 | 8638162 ~ 8646941 (-) | True | XLOC_001003 |
| TCONS_00001592 | mRNA | upstream | 30455 | 8649099 ~ 8652732 (-) | False | XLOC_001004 |
| TCONS_00001593 | mRNA | upstream | 31260 | 8649904 ~ 8651718 (-) | False | XLOC_001004 |
| TCONS_00001594 | mRNA | upstream | 31452 | 8650096 ~ 8652655 (-) | False | XLOC_001004 |
| TCONS_00001596 | mRNA | upstream | 31552 | 8650196 ~ 8652648 (-) | False | XLOC_001004 |
| TCONS_00001587 | other | downstream | 62237 | 8552750 ~ 8553298 (-) | True | XLOC_000999 |
| TCONS_00001570 | other | downstream | 639766 | 7970406 ~ 7975769 (-) | True | XLOC_000989 |
| TCONS_00001564 | other | downstream | 695329 | 7920119 ~ 7920206 (-) | True | XLOC_000985 |
| TCONS_00001563 | other | downstream | 695968 | 7919480 ~ 7919567 (-) | True | XLOC_000984 |
| TCONS_00001562 | other | downstream | 696653 | 7918795 ~ 7918882 (-) | False | XLOC_000984 |
| TCONS_00001595 | other | upstream | 31465 | 8650109 ~ 8652655 (-) | False | XLOC_001004 |
| TCONS_00001610 | other | upstream | 499456 | 9118100 ~ 9118671 (-) | False | XLOC_001012 |
| TCONS_00001617 | other | upstream | 579215 | 9197859 ~ 9197966 (-) | True | XLOC_001018 |
| TCONS_00001629 | other | upstream | 841366 | 9460010 ~ 9486080 (-) | False | XLOC_001025 |
| TCONS_00001646 | other | upstream | 1122158 | 9740802 ~ 9816875 (-) | True | XLOC_001029 |
