RNA id: TCONS_00025773


Basic Information

Item Value
RNA id TCONS_00025773
length 954
RNA type mRNA
GC content 0.44
exon number 9
gene id XLOC_012938
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 35128685 ~ 35148310 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTGAGCCTGGAAGTGTAAAGCAAGGAATAGTTACACACCCACCTACACTGGATACAATGTTGACAGAGCAACGAGGGAAAGTACTCTATGACTGTGGAATCTGCCATCATGACAGGGGGAAGCAAAACACAGGTTTTAGTGGCGAGATGGAAGGCAGCAATAACCTGCACTGTTGTGGAAATCAGTCTTACAACATCTTAAGAAGCTCCTGCTGCAATGACCCTTACCAAACAACGAATCATATATGTTGTGGTGATGTATtgctgaaaaaacaacaaaagaagaaaTGTTGTGGCAAGGAACTATTTGACACACTGACCGAGTGCTGCTGTGACCAAGACCTAGTCTTAGCAATAAAGCCCAAAAGTGATCCTTGCTGTCAGACTAAACCAGTTGAAAAATCTGAATCCTCACAATGCTCTCAGGCCTCTGGAGCGCACAACAATATTGCAGAGAATTGTGGATCCTATGATCCTCAGACACATATTTGTTGCTCAGGGTTTCTGTACAGGAAGGCATCAGAACTTACTAAGTGCTGCGGAAAACACCTTTACACTTTCTCCGAGGGAAACGTTCTGTGTTGTAATGGAATCTTGCATCGAGATATGCCTGAGAAGTCAGAATGTATTGGAGGTGTTGTATATTCTCCAGGAAACACTACATGCCATCTGCCTGTTCGTCCCCAAATTGGCGAGCACTGTTGTGGAAATCAAACCTTCGATCCTCTTATCCATATTTGCTGTAATGGACACAGACACAACAAGAAAAATGGTAATGTCTGTTGTGGTTCCAAAGTCTATGACCACCACAACACGTCCTTGAGGTGCTGCTCTGATCATCTTTACAGTACACCTAGTGGAGAAGTAGAGTGCTGTGGAAACCACTTGCTGGAAAAAAATCAAATTTGCTGTTCCTCCTCAACCCTGGCCGTGAAATATTTCACCAAATTGAATC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-120215-210 No description available

Ensembl:

ensembl_id ENSDART00000151579

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027135 lncRNA upstream 52911 35075415 ~ 35075774 (+) True XLOC_012937
TCONS_00027134 lncRNA upstream 54048 35072976 ~ 35074637 (+) True XLOC_012936
TCONS_00027131 lncRNA upstream 90276 34942728 ~ 35038409 (+) False XLOC_012935
TCONS_00027132 lncRNA upstream 90276 35018332 ~ 35038409 (+) False XLOC_012935
TCONS_00027133 lncRNA upstream 90276 35033770 ~ 35038409 (+) True XLOC_012935
TCONS_00025778 lncRNA downstream 30598 35173862 ~ 35182693 (+) False XLOC_012939
TCONS_00027136 lncRNA downstream 287742 35431006 ~ 35431848 (+) True XLOC_012942
TCONS_00027137 lncRNA downstream 997952 36141216 ~ 36409181 (+) False XLOC_012949
TCONS_00026918 lncRNA downstream 1255860 36399124 ~ 36409313 (+) True XLOC_012949
TCONS_00026919 lncRNA downstream 1741353 36884617 ~ 36884817 (+) True XLOC_012956
TCONS_00025771 mRNA upstream 193507 34861568 ~ 34935178 (+) True XLOC_012934
TCONS_00025770 mRNA upstream 291877 34667486 ~ 34836808 (+) True XLOC_012933
TCONS_00025769 mRNA upstream 486599 34601023 ~ 34642086 (+) True XLOC_012932
TCONS_00025767 mRNA upstream 486622 34599315 ~ 34642063 (+) False XLOC_012932
TCONS_00025768 mRNA upstream 526736 34599322 ~ 34601949 (+) False XLOC_012932
TCONS_00025776 mRNA downstream 30419 35173683 ~ 35197599 (+) False XLOC_012939
TCONS_00025777 mRNA downstream 30595 35173859 ~ 35182693 (+) False XLOC_012939
TCONS_00025780 mRNA downstream 85851 35229115 ~ 35251377 (+) True XLOC_012940
TCONS_00025781 mRNA downstream 264657 35407921 ~ 35413608 (+) True XLOC_012941
TCONS_00025782 mRNA downstream 599574 35742838 ~ 35802474 (+) False XLOC_012943
TCONS_00025772 other upstream 54062 35072976 ~ 35074623 (+) False XLOC_012936
TCONS_00025746 other upstream 1501835 33622917 ~ 33626850 (+) False XLOC_012918
TCONS_00025732 other upstream 1684428 33443264 ~ 33444257 (+) True XLOC_012909
TCONS_00025687 other upstream 3039741 32084939 ~ 32088944 (+) True XLOC_012873
TCONS_00025679 other upstream 3282129 31845504 ~ 31846556 (+) True XLOC_012868
TCONS_00025779 other downstream 30608 35173872 ~ 35176134 (+) True XLOC_012939
TCONS_00025784 other downstream 663584 35806848 ~ 35806966 (+) True XLOC_012944
TCONS_00025785 other downstream 676185 35819449 ~ 35819563 (+) True XLOC_012945
TCONS_00025791 other downstream 997969 36141233 ~ 36142754 (+) False XLOC_012949
TCONS_00025796 other downstream 1486556 36629820 ~ 36631294 (+) False XLOC_012951

Expression Profile

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