Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU151846 |
| length | 610 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 1 |
| gene id | mxtx2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31255824 ~ 31261130 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0002009 | morphogenesis of an epithelium | biological_process |
| GO:0007369 | gastrulation | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU151849 | lncRNA | upstream | 3389 | 31255824 ~ 31257043 (+) | False | mxtx2 |
| TU151863 | lncRNA | upstream | 7963 | 31252258 ~ 31252469 (+) | True | G131815 |
| TU151861 | lncRNA | upstream | 10599 | 31249619 ~ 31249833 (+) | True | G131813 |
| TU151836 | lncRNA | upstream | 31854 | 31228173 ~ 31228578 (+) | True | G131794 |
| TU151824 | lncRNA | upstream | 52197 | 31207976 ~ 31208235 (+) | True | G131782 |
| TU151870 | lncRNA | downstream | 32637 | 31293678 ~ 31294226 (+) | True | LOC110534710 |
| TU151886 | lncRNA | downstream | 34656 | 31295697 ~ 31295995 (+) | True | G131835 |
| TU151898 | lncRNA | downstream | 74241 | 31335282 ~ 31388272 (+) | True | G131847 |
| TU151939 | lncRNA | downstream | 134048 | 31395089 ~ 31395472 (+) | True | G131886 |
| TU151952 | lncRNA | downstream | 170277 | 31431318 ~ 31431552 (+) | True | G131899 |
| XM_021558742.2 | mRNA | upstream | 38353 | 31208985 ~ 31222079 (+) | False | LOC110486889 |
| XM_021558750.2 | mRNA | upstream | 38353 | 31208985 ~ 31222079 (+) | True | LOC110486889 |
| XM_036933421.1 | mRNA | upstream | 58040 | 31199335 ~ 31202392 (+) | False | sri |
| XM_036945726.1 | mRNA | downstream | 1013 | 31262054 ~ 31294577 (+) | False | LOC110534710 |
| XM_021558804.2 | mRNA | downstream | 38961 | 31300002 ~ 31315913 (+) | True | LOC110486933 |
| XM_021558857.2 | mRNA | downstream | 99367 | 31360408 ~ 31366322 (+) | False | eaf1 |
| XM_036945728.1 | mRNA | downstream | 99367 | 31360408 ~ 31366322 (+) | False | eaf1 |
| XM_036945732.1 | mRNA | downstream | 328433 | 31589474 ~ 31624014 (+) | False | LOC110486995 |
| TU151514 | other | upstream | 510478 | 30748055 ~ 30749954 (+) | True | G131517 |
| TU151478 | other | upstream | 559809 | 30700182 ~ 30700623 (+) | True | G131491 |
| TU150298 | other | upstream | 1470601 | 29789576 ~ 29789831 (+) | True | G130414 |
| TU150246 | other | upstream | 1566581 | 29685967 ~ 29693851 (+) | True | LOC110486279 |
| TU150186 | other | upstream | 1619336 | 29600026 ~ 29641096 (+) | True | G130308 |
| TU151868 | other | downstream | 30429 | 31291470 ~ 31293034 (+) | False | LOC110534710 |
| TU151908 | other | downstream | 99395 | 31360436 ~ 31363213 (+) | False | eaf1 |
| TU151909 | other | downstream | 99395 | 31360436 ~ 31366322 (+) | True | eaf1 |
| TU152486 | other | downstream | 596607 | 31857648 ~ 31887572 (+) | False | G132342 |
| TU152482 | other | downstream | 596645 | 31857686 ~ 31883073 (+) | True | G132342 |
