Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162246 |
| length | 418 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 1 |
| gene id | znf407 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39569485 ~ 39766378 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162245 | lncRNA | upstream | 638 | 39764815 ~ 39765313 (+) | False | znf407 |
| TU162378 | lncRNA | upstream | 4689 | 39761038 ~ 39761262 (+) | True | G141270 |
| TU162375 | lncRNA | upstream | 8062 | 39757573 ~ 39757889 (+) | True | G141267 |
| TU162370 | lncRNA | upstream | 22359 | 39743308 ~ 39743592 (+) | True | G141262 |
| TU162369 | lncRNA | upstream | 22844 | 39742888 ~ 39743107 (+) | True | G141261 |
| TU162496 | lncRNA | downstream | 2753 | 39769121 ~ 39769405 (+) | True | G141367 |
| TU162499 | lncRNA | downstream | 4811 | 39771179 ~ 39771552 (+) | True | G141370 |
| TU162501 | lncRNA | downstream | 5946 | 39772314 ~ 39772515 (+) | True | G141372 |
| TU162506 | lncRNA | downstream | 9126 | 39775494 ~ 39775716 (+) | True | G141377 |
| TU162507 | lncRNA | downstream | 9942 | 39776310 ~ 39776512 (+) | True | G141378 |
| XM_021562327.2 | mRNA | upstream | 218588 | 39540706 ~ 39547363 (+) | True | LOC110489590 |
| XM_021562317.2 | mRNA | upstream | 235093 | 39527602 ~ 39530858 (+) | True | LOC110489581 |
| XM_021562306.2 | mRNA | upstream | 241020 | 39521563 ~ 39524931 (+) | True | LOC110489572 |
| XM_021562272.2 | mRNA | upstream | 245329 | 39503436 ~ 39520622 (+) | False | LOC110489537 |
| XM_021562345.2 | mRNA | downstream | 55512 | 39821880 ~ 39862520 (+) | True | LOC110489609 |
| XR_005036684.1 | mRNA | downstream | 349590 | 40115958 ~ 40222642 (+) | False | LOC110489640 |
| XM_036948247.1 | mRNA | downstream | 349590 | 40115958 ~ 40225332 (+) | False | LOC110489640 |
| XM_036948253.1 | mRNA | downstream | 350064 | 40116432 ~ 40225332 (+) | False | LOC110489640 |
| XM_036948250.1 | mRNA | downstream | 350397 | 40116765 ~ 40225332 (+) | False | LOC110489640 |
| TU160072 | other | upstream | 1714207 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 1821939 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU159977 | other | upstream | 1825237 | 37920391 ~ 37940714 (+) | True | G139089 |
| TU159972 | other | upstream | 1843881 | 37920348 ~ 37922070 (+) | False | G139089 |
| TU164559 | other | downstream | 1772927 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU165213 | other | downstream | 2202006 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | downstream | 2202006 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU166008 | other | downstream | 2743962 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 3964504 | 43730872 ~ 43731218 (+) | True | G146054 |
