Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU165482 |
| length | 475 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G144176 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 42385198 ~ 42385672 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU165303 | lncRNA | upstream | 164995 | 42139048 ~ 42220203 (+) | True | LOC110489919 |
| TU165295 | lncRNA | upstream | 167423 | 42139048 ~ 42217775 (+) | False | LOC110489919 |
| TU165338 | lncRNA | upstream | 246184 | 42138760 ~ 42139014 (+) | True | G144034 |
| TU165321 | lncRNA | upstream | 294283 | 42090612 ~ 42090915 (+) | True | G144017 |
| TU165320 | lncRNA | upstream | 295668 | 42089290 ~ 42089530 (+) | True | G144016 |
| TU165972 | lncRNA | downstream | 16226 | 42401898 ~ 42402244 (+) | True | G144629 |
| TU165977 | lncRNA | downstream | 19205 | 42404877 ~ 42405121 (+) | True | G144634 |
| TU166062 | lncRNA | downstream | 98169 | 42483841 ~ 42486432 (+) | False | G144706 |
| TU166065 | lncRNA | downstream | 98169 | 42483841 ~ 42486432 (+) | True | G144706 |
| TU166134 | lncRNA | downstream | 179880 | 42565552 ~ 42607102 (+) | True | G144751 |
| XM_021563003.2 | mRNA | upstream | 1241 | 42251937 ~ 42383957 (+) | True | LOC110489963 |
| XM_021562938.2 | mRNA | upstream | 167423 | 42150331 ~ 42217775 (+) | False | LOC110489919 |
| XM_021562946.2 | mRNA | upstream | 169384 | 42150330 ~ 42215814 (+) | False | LOC110489919 |
| XM_021562952.2 | mRNA | upstream | 169384 | 42150331 ~ 42215814 (+) | False | LOC110489919 |
| XM_021562971.2 | mRNA | upstream | 169384 | 42150331 ~ 42215814 (+) | False | LOC110489919 |
| XM_021563049.2 | mRNA | downstream | 143409 | 42529081 ~ 42572673 (+) | False | LOC110489991 |
| XM_021563058.2 | mRNA | downstream | 143409 | 42529081 ~ 42572673 (+) | True | LOC110489991 |
| XM_036948784.1 | mRNA | downstream | 196687 | 42582359 ~ 42592552 (+) | False | LOC110489996 |
| XM_036948800.1 | mRNA | downstream | 196687 | 42582359 ~ 42592552 (+) | False | LOC110489996 |
| XM_036948791.1 | mRNA | downstream | 196853 | 42582525 ~ 42592552 (+) | True | LOC110489996 |
| TU165213 | other | upstream | 415881 | 41968374 ~ 41969317 (+) | False | G143938 |
| TU165214 | other | upstream | 415976 | 41968374 ~ 41969222 (+) | True | G143938 |
| TU164559 | other | upstream | 843607 | 41539295 ~ 41541591 (+) | True | LOC110489834 |
| TU160072 | other | upstream | 4333454 | 38051359 ~ 38051744 (+) | True | G139179 |
| TU159989 | other | upstream | 4441186 | 37943742 ~ 37944012 (+) | True | G139101 |
| TU166008 | other | downstream | 124658 | 42510330 ~ 42566030 (+) | True | G144661 |
| TU167624 | other | downstream | 1345200 | 43730872 ~ 43731218 (+) | True | G146054 |
| TU167665 | other | downstream | 1383035 | 43768707 ~ 43769162 (+) | True | G146091 |
| TU167688 | other | downstream | 1413732 | 43799404 ~ 43799853 (+) | True | G146114 |
| TU167748 | other | downstream | 1500924 | 43886596 ~ 43889609 (+) | False | G146165 |
