Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU182262 |
| length | 244 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G159697 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 54594260 ~ 54594503 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182066 | lncRNA | upstream | 63270 | 54530785 ~ 54530990 (+) | True | G159507 |
| TU182025 | lncRNA | upstream | 104853 | 54488779 ~ 54489407 (+) | True | G159466 |
| TU181972 | lncRNA | upstream | 239929 | 54354056 ~ 54354331 (+) | True | G159417 |
| TU181966 | lncRNA | upstream | 242538 | 54346852 ~ 54351722 (+) | True | G159412 |
| TU181961 | lncRNA | upstream | 249885 | 54344009 ~ 54344375 (+) | True | G159407 |
| TU182475 | lncRNA | downstream | 141297 | 54735800 ~ 54736001 (+) | True | G159896 |
| TU182502 | lncRNA | downstream | 157664 | 54752167 ~ 54752497 (+) | True | G159923 |
| TU182519 | lncRNA | downstream | 166828 | 54761331 ~ 54761557 (+) | True | G159940 |
| TU182532 | lncRNA | downstream | 174321 | 54768824 ~ 54847968 (+) | True | G159949 |
| TU182632 | lncRNA | downstream | 346597 | 54941100 ~ 54941681 (+) | True | G160045 |
| XM_021565562.2 | mRNA | upstream | 89664 | 54491725 ~ 54504596 (+) | False | calml4b |
| XM_021565556.2 | mRNA | upstream | 89664 | 54491746 ~ 54504596 (+) | True | calml4b |
| XM_021579388.2 | mRNA | upstream | 107351 | 54474023 ~ 54486909 (+) | True | cln6b |
| XM_021565519.2 | mRNA | upstream | 138306 | 54364918 ~ 54455954 (+) | False | itga11b |
| XM_021565598.2 | mRNA | downstream | 258309 | 54852812 ~ 54944780 (+) | False | spg11 |
| XM_021565607.2 | mRNA | downstream | 258309 | 54852812 ~ 54944780 (+) | False | spg11 |
| XM_021565615.2 | mRNA | downstream | 258309 | 54852812 ~ 54944780 (+) | True | spg11 |
| XM_021565626.2 | mRNA | downstream | 357398 | 54951901 ~ 54976149 (+) | True | LOC110491832 |
| XR_005037089.1 | mRNA | downstream | 405936 | 55000439 ~ 55024185 (+) | True | LOC118940499 |
| TU181970 | other | upstream | 240872 | 54352983 ~ 54353388 (+) | True | G159415 |
| TU181296 | other | upstream | 572356 | 54021608 ~ 54021904 (+) | True | G158778 |
| TU178397 | other | upstream | 2770078 | 51816510 ~ 51824182 (+) | False | G156000 |
| TU177903 | other | upstream | 3173138 | 51420847 ~ 51421122 (+) | True | G155541 |
| TU177846 | other | upstream | 3177142 | 51412266 ~ 51417118 (+) | True | rl28 |
| TU182462 | other | downstream | 133793 | 54728296 ~ 54728860 (+) | True | G159889 |
| TU183214 | other | downstream | 1351640 | 55946143 ~ 55947245 (+) | True | G160569 |
| TU184425 | other | downstream | 1650541 | 56245044 ~ 56252598 (+) | True | G161687 |
| TU184934 | other | downstream | 2453811 | 57048314 ~ 57053642 (+) | True | G162130 |
| TU186506 | other | downstream | 3333647 | 57928150 ~ 57931991 (+) | True | G163513 |
