Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU321741 |
| length | 704 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 4 |
| gene id | LOC110520349 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 62423414 ~ 62430935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU320950 | lncRNA | upstream | 13973 | 62409223 ~ 62409441 (+) | True | G282976 |
| TU320878 | lncRNA | upstream | 103021 | 62303483 ~ 62320393 (+) | True | G282907 |
| TU320783 | lncRNA | upstream | 249052 | 62164883 ~ 62174362 (+) | False | G282815 |
| TU320782 | lncRNA | upstream | 249052 | 62168152 ~ 62174362 (+) | True | G282815 |
| TU320790 | lncRNA | upstream | 251522 | 62169746 ~ 62171892 (+) | True | G282822 |
| TU321739 | lncRNA | downstream | 146 | 62425693 ~ 62430935 (+) | True | LOC110520349 |
| TU321806 | lncRNA | downstream | 91254 | 62516801 ~ 62518422 (+) | True | G283779 |
| TU321835 | lncRNA | downstream | 150936 | 62576483 ~ 62577684 (+) | True | G283802 |
| TU321833 | lncRNA | downstream | 152908 | 62578455 ~ 62579127 (+) | True | G283800 |
| TU321848 | lncRNA | downstream | 173203 | 62598750 ~ 62605356 (+) | True | LOC110504388 |
| XM_021597601.2 | mRNA | upstream | 17018 | 62367489 ~ 62406396 (+) | False | LOC110520346 |
| XR_002472968.2 | mRNA | upstream | 136596 | 62281719 ~ 62286818 (+) | True | LOC110520345 |
| XM_021597600.2 | mRNA | upstream | 150585 | 62254960 ~ 62272829 (+) | True | LOC110520344 |
| XM_021597598.2 | mRNA | upstream | 168603 | 62249459 ~ 62254811 (+) | True | med4 |
| XM_021597596.2 | mRNA | upstream | 219664 | 62200831 ~ 62203750 (+) | True | LOC110520341 |
| XM_021597610.2 | mRNA | downstream | 109099 | 62534646 ~ 62542031 (+) | False | rubcnl |
| XM_021597609.2 | mRNA | downstream | 109100 | 62534647 ~ 62542031 (+) | True | rubcnl |
| XM_021597612.2 | mRNA | downstream | 118030 | 62543577 ~ 62547782 (+) | True | dhrs12 |
| XM_036974865.1 | mRNA | downstream | 173130 | 62598677 ~ 62612475 (+) | False | LOC110504388 |
| XM_036974868.1 | mRNA | downstream | 173130 | 62598677 ~ 62612475 (+) | False | LOC110504388 |
| TU320883 | other | upstream | 14557 | 62367614 ~ 62408857 (+) | True | LOC110520346 |
| TU320785 | other | upstream | 226463 | 62193604 ~ 62196951 (+) | True | LOC110520339 |
| TU320641 | other | upstream | 461939 | 61957388 ~ 61961475 (+) | True | G282707 |
| TU319833 | other | upstream | 1386309 | 61033766 ~ 61037105 (+) | True | G281996 |
| TU319500 | other | upstream | 1529636 | 60891524 ~ 60893778 (+) | True | G281714 |
| TU321897 | other | downstream | 280784 | 62706331 ~ 62706970 (+) | True | LOC110504398 |
| TU322433 | other | downstream | 590779 | 63016326 ~ 63022591 (+) | True | G284313 |
| TU322474 | other | downstream | 700343 | 63125890 ~ 63128958 (+) | True | LOC110520364 |
| TU322683 | other | downstream | 841572 | 63267119 ~ 63312394 (+) | False | G284537 |
| TU322754 | other | downstream | 965384 | 63390931 ~ 63391284 (+) | True | G284599 |
