RNA id: TU292970



Basic Information


Item Value
RNA id TU292970
length 215
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G257212
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 40784114 ~ 40784328 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tcactccagagagtgcatttccactgctccaaagtccaatggcggcgtgctttacaccacttcagccgatGCTTGGAATTGagcatgaagctcccgactaacagctCTTGTGGTGACGTtgcatccagaggcagtttagaactcggtagtgagtgttgcaaccaaggacagatagTTTTACGCCCTACGttcttcagcactcagcggtcccattc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU292399 lncRNA downstream 417196 40366705 ~ 40366918 (-) True G256669
TU292374 lncRNA downstream 441279 40342625 ~ 40342835 (-) True G256644
TU292325 lncRNA downstream 478087 40305653 ~ 40306027 (-) True G256595
TU292316 lncRNA downstream 486457 40296924 ~ 40297657 (-) True G256586
TU292126 lncRNA downstream 638955 40144925 ~ 40145159 (-) True G256400
TU292984 lncRNA upstream 7455 40791783 ~ 40791987 (-) True G257226
TU292991 lncRNA upstream 12763 40797091 ~ 40797349 (-) True G257233
TU293007 lncRNA upstream 24767 40809095 ~ 40809374 (-) True G257249
TU293048 lncRNA upstream 49678 40834006 ~ 40834223 (-) True G257290
TU293050 lncRNA upstream 50551 40834879 ~ 40835127 (-) True G257292
XM_021596894.2 mRNA downstream 379079 40396378 ~ 40405035 (-) True LOC110519968
XR_005039881.1 mRNA downstream 501238 40279614 ~ 40282876 (-) True LOC118944520
XM_021596892.2 mRNA downstream 658851 40111206 ~ 40125263 (-) False LOC110519967
XM_036974106.1 mRNA upstream 1459248 42243576 ~ 42291605 (-) False LOC110519979
XM_036974107.1 mRNA upstream 1459248 42243576 ~ 42291605 (-) False LOC110519979
XM_036974108.1 mRNA upstream 1459248 42243576 ~ 42291605 (-) False LOC110519979
XM_036974109.1 mRNA upstream 1459248 42243576 ~ 42291605 (-) False LOC110519979
XM_036974110.1 mRNA upstream 1459248 42243576 ~ 42291605 (-) False LOC110519979
TU292362 other downstream 448674 40335210 ~ 40335440 (-) True G256632
TU292346 other downstream 461216 40322506 ~ 40322898 (-) True G256616
TU291727 other downstream 965134 39818648 ~ 39818980 (-) True G256016
TU291595 other downstream 1138371 39644571 ~ 39645743 (-) True G255911
TU291417 other downstream 1275412 39399261 ~ 39508702 (-) True LOC110519955
TU295117 other upstream 979489 41763817 ~ 41767588 (-) True G259259
TU295466 other upstream 1501302 42285630 ~ 42293169 (-) False G259576
TU295453 other upstream 1504664 42288992 ~ 42290036 (-) False G259576
TU295465 other upstream 1504664 42288992 ~ 42327995 (-) False G259576
TU295472 other upstream 1505931 42290259 ~ 42319385 (-) False G259579

Expression Profile