RNA id: TCONS_00030900


Basic Information

Item Value
RNA id TCONS_00030900
length 2568
RNA type mRNA
GC content 0.51
exon number 15
gene id XLOC_015448
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24700922 ~ 24755347 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAACGTCCCACGGTACGACATCAATTGCACCCTCAAAGTTTGTTCCTTACTTCGATGCTCTTCTGCCTGAGGTGATTGTCATTTCATACTCTGAAAATGGCTGCGGATGGCTTCCAGTACAGATCCATCTACTCCTACCGTAAGGACTGGGAGCATGACATTGACCTTGAGCCTGGTGATATCCTGACAGTGGACAAAGGGTCTCTGCTGTCATTGGGCATCAAAGAGGGCGACGAGCAGCACCCCGAATGCATCGGCTGGATCTTGGGCTTTAATGAGCGAACCAAACAGAGGGGAGACTTTCCAGGGACATATGTGCAGTATGTGGGACCTGTGAAATTGTCAGCGCCGTACTGCCAGCCTCGTTCTCAGAGACCACTTCCTGCTGTTCCCAGACCTGAGCCAACAGCCTCCTTGCAGGTTGTTCCAGACCTAGACTTGACCAAACAGTTCATGCACCCGGAAACTGCTCCCCCTAATCTGATTAAGCTGATCGAAGCAGTTGAGCGGTCAGGTCTGGACTGCAGGACACTGTACAGGACTTCAGCCTCTGACAATCAGCGACCGAGCCTCAGCGAGCTGCAGGATCTGGACGTGGGACAGTGGGACATTCATGCGCTTTCGGAGGCTGTGATTCGGTACCTCCAGGACCTTCCTGCCCCCATCATCCCTCCCTGTGTTTATACAGACCTTCAGGCAGCAGTGCAGCTCGAATCGGACGTCCCCTCCGTGAGGAGACGTGAGCTGCTTCAGCAGGTCCTGGACAAGCCTGAGGTTCCTCTGCAGAACCTGCTGACACTGCATTATTTGCTTCAACACCTGGACAAGGTCTGTCAGTCCGCTGAGCAGAACGGCCTCGACATTTACACCCTGGGCCAGATCTTCGGCCCTCTcctgttcaggggccctgtgagCGGGTCAGAGGAAGATGAGGCGTTTCCTGCAGCTGCAGTTGAGAGACTTCTTTTGGAGAGAATTTGGGAACAAGAGCCGACTCCTCCCGCTCTTCCTCCAAAACCGCCCAAAGCCAAAGCCATGGCCTCATCTGTGACTAATGGAAGCGACAGCTTACTGAGTGAAGCTGAATGGTACTGGGGAGATATTTCAAGAGAGGAAGTGAATGAAAAAATGAGAGACACTCCTGATGGTACGTTCTTGGTGCGGGACGCTTCAAGCAAAGTGCACGGAGAGTACACTTTGACCCTCAGGAAAGGAGGCAATAACAAACTGATCAAGATTTTTCATCGCGGGGGCAAGTACGGCTTCTCTGAGCCTCTTACTTTTCTCTCTGTGGTGGAGCTCATCAACCACTACCGCCATGAGTCACTGGCGCAGTATAACGCCAAGCTGGACTCTCACCTGCTCTTCCCCGTCTCCAAATATCAGCAGgaTCAGGTGGTGAAAGAGGACAGTATAGAGGCAGTGGGAGAGCAGCTGAAGGTTTATCACGAGCAGTATCAGGAGAAGAGTCGTGAATATGACGTACTGTACGAGGAATACACACGCTCATCACAAGAGTTGCAGATGAAGCGGACTGCCATTGAGGCGTTCAACGAGACCATCAAGATCTTTGAGGAGCAGTGCGAGACCCAGGAGCGCCTCAGTAGAGACAGCATTGAGAAGTTTCGCAGGGAAGGAAACGACAAGGAGATTGAGAGaaTTCAGAGTAACTCGGAGAAGCTGAAGTCTAGAGTGACAGAGATTCATGACAGCAAGAGGAAGTTGGAACTGGATTTGAAGCGGCAAGCTACAGACAATCGAGAGATAGACAAGCTAATGAACAGCTTGAAACCAGACCTCATTCAGCTGAGGAAGCTAAGGGACCAATATCTTGTATGGCTGACTCAGAAAGGCACCAGGCAAAGGAAGATCAATGAATGGCTGGGAATAAAGAATGAATCAGAGGACTTCTATTCTCTGCTGGACGACGATGACGATCAAGCGCATCATGACGAGTGCTCCTGGTACGTTGGAGACATCAAGCGCTCGTATGCAGAGGATCTCCTGAGAGGCAAACGCGATGGCACCTTCCTCATCAGAGAGAGCCAGACCCAGAAGGGCTCCTTCGCCTGCTCTGTAGTTGTGGAAGGAGAAATCAAACATTGTGTGGTTTACAAGACGGCCACAGGTTTCGGATTTGCTGAACCCTACAACCTTTACGGCTCCTTGAAAGACTTGGTCCTGCACTACAAACACACGTCTCTGGTCCAGCACAACGACTCGCTGAATGTAACCCTGGCCTACCCGGTGCTCGCACAGCAGCCTAGATGAGCACCGCTTCACCACATGGCCCGGGACACGCATATAAAGCATGATTAAGCACATTATTCAGAGCAAAATATACTAACACCCAACGTTTATGTTTATCGTAGAGAACAGATAAGCACAGCATATTATCGTTAAGTAAACGTACGGCTTTTTTGTAAGCCCATAGTTTTTCCATATCGATCAAAGTCAGCTGCAGTAGTTACGGTAAGATCACAGCTTTTCTGTATTTGTCGTCTCAACATGAGATGGATAGCGTCACACGATTCCACAAACGCTCAAACTAGTGTGGCAGTCCTAGAT

Function

GO:

id name namespace
GO:0043551 regulation of phosphatidylinositol 3-kinase activity biological_process
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0008286 insulin receptor signaling pathway biological_process
GO:0016310 phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0016740 transferase activity molecular_function
GO:0046935 1-phosphatidylinositol-3-kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040309-1 Predicted to enable 1-phosphatidylinositol-3-kinase regulator activity. Predicted to be involved in insulin receptor signaling pathway; phosphatidylinositol phosphate biosynthetic process; and regulation of phosphatidylinositol 3-kinase activity. Predicted to act upstream of or within phosphorylation and signal transduction. Predicted to be part of phosphatidylinositol 3-kinase complex. Human ortholog(s) of this gene implicated in pancreatic ductal adenocarcinoma. Orthologous to human PIK3R2 (phosphoinositide-3-kinase regulatory subunit 2).

Ensembl:

ensembl_id ENSDART00000170467

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033541 lncRNA upstream 88854 24603292 ~ 24612068 (+) True XLOC_015446
TCONS_00030894 lncRNA upstream 191224 24507770 ~ 24509698 (+) False XLOC_015444
TCONS_00033540 lncRNA upstream 212768 24484273 ~ 24488154 (+) False XLOC_015443
TCONS_00030890 lncRNA upstream 212768 24484275 ~ 24488154 (+) False XLOC_015443
TCONS_00030881 lncRNA upstream 439626 24261217 ~ 24261296 (+) True XLOC_015437
TCONS_00030903 lncRNA downstream 14263 24762638 ~ 24764588 (+) True XLOC_015450
TCONS_00033543 lncRNA downstream 155291 24903666 ~ 24906615 (+) True XLOC_015455
TCONS_00033263 lncRNA downstream 163918 24912293 ~ 24927754 (+) True XLOC_015456
TCONS_00030918 lncRNA downstream 382148 25130523 ~ 25137789 (+) True XLOC_015461
TCONS_00030924 lncRNA downstream 567283 25315658 ~ 25382341 (+) False XLOC_015463
TCONS_00030899 mRNA upstream 17557 24638367 ~ 24683365 (+) True XLOC_015447
TCONS_00030896 mRNA upstream 158404 24536762 ~ 24542518 (+) False XLOC_015445
TCONS_00030892 mRNA upstream 191224 24507597 ~ 24509698 (+) False XLOC_015444
TCONS_00030893 mRNA upstream 191226 24507770 ~ 24509696 (+) False XLOC_015444
TCONS_00030895 mRNA upstream 191226 24507777 ~ 24509696 (+) True XLOC_015444
TCONS_00030902 mRNA downstream 14192 24762567 ~ 24767470 (+) False XLOC_015450
TCONS_00030904 mRNA downstream 22060 24770435 ~ 24778912 (+) True XLOC_015451
TCONS_00030905 mRNA downstream 32651 24781026 ~ 24843233 (+) False XLOC_015452
TCONS_00030906 mRNA downstream 38390 24786765 ~ 24866649 (+) False XLOC_015452
TCONS_00030907 mRNA downstream 71415 24819790 ~ 24862961 (+) False XLOC_015452
TCONS_00030897 other upstream 160157 24540047 ~ 24540765 (+) False XLOC_015445
TCONS_00030898 other upstream 160197 24540209 ~ 24540725 (+) True XLOC_015445
TCONS_00030891 other upstream 203081 24484289 ~ 24497841 (+) True XLOC_015443
TCONS_00030885 other upstream 349882 24348589 ~ 24351040 (+) True XLOC_015440
TCONS_00030870 other upstream 685979 24013250 ~ 24014943 (+) True XLOC_015433
TCONS_00030908 other downstream 94212 24842587 ~ 24845999 (+) True XLOC_015452
TCONS_00030940 other downstream 1285800 26034175 ~ 26039606 (+) True XLOC_015468
TCONS_00030946 other downstream 1538090 26286465 ~ 26287505 (+) True XLOC_015473
TCONS_00030957 other downstream 1750159 26498534 ~ 26501294 (+) False XLOC_015477
TCONS_00030958 other downstream 1750186 26498561 ~ 26501275 (+) False XLOC_015477

Expression Profile

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