RNA id: TCONS_00031015


Basic Information

Item Value
RNA id TCONS_00031015
length 2473
RNA type mRNA
GC content 0.53
exon number 12
gene id XLOC_015512
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 29795833 ~ 29896572 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCCAGAGCAGAAAACAAAGCAGTGCGGATGAGAGCGAGCAGCCAGAGTCCTGGTCCCCTCGCACCGTCCCTCGGAGACACACAGTAGGAGGACCTCGCACTGCCGGAGACGTGATCGTCCTGCAGTCTTACAACATGGACCACAAGAAAGAGGCCTTTCTCGAGCATCTGAAACAGAAGTATCCTCATCATGCCTCTGTCATCATGGGCCACCAGGAACGACTCAGAGAACATATCAGGAGTTCTGGGCACAGTGTGACCCCTCAGTCTACTGTAGGGGAGCTGGGGGAGCATCTCTCCTTGGCCCCTCTTGAGTGTTTGGAGGCCATGTCGGAGGGAGAAGCCCCGTCCGCCTTCACCCGAGGTAGCCGCTCCCGAGCAAGCCTCCCTGTGGTCAAGTCAACTAACCAGACCAAGGACAGGTCATTAGGTTTTCTCTACCTGCAGTATGGAGAGGAGACCAAACAAATCCGAATGCCCAATGAAGTGACCAGTTCGGACACCATCAGGGCTCTGTTCGTCAGTGCCTTCCCTCAGCACCTCAACATGAAGATACTGGACTCTCCCAATGTGGCTATATACATCAAAGATGACATGAGGAATATGTACTATGAGCTGACCGACGTCAGGAACATCACACCACAATCTTGCCTGAAGGTGTATCACAAAGATCCAGCCCAGGCCTTCAATCACAACGCAAGAGCCAATAATGGAGATATTAGGATCACAAGAGAGCGACTCTACAGCAGCAGACAGCAGCCAGGAGGCCAAAGCCCAGTGCACACTCTTCCTCACAGTCCCATACATTCAGTCCAAGGCTCCATGTCTCCTCCTACACCTCGCTCCATGCCCTCCTCCCCCTCCAGGATTCCCTATGGTCACTCAGTTGCCATGCCCGGTGGTGCCACCTTACCCAGAGACCGTCTGTCCAGCGTGCCTCCCAGTCGCTCCACCACACCCTGTGTCAGTGCTATCCTTGAGCGACGGGATGTCAAACCTGACGAGGATCTTAGCAGCAAGTATGCAGAAGCATACGGTTCACCTGAAGCCAGACTCAGCATTGCCTCATCCCAAAGCAGCCACACCGGAGACGTCCCGGATGGGGCGGCATACATCCAGCATCGCTCCTCAGTCAAATACGCAGAAGGACAAGACCTCCAGCACGCAGTCTTTCGTCAGAAATCCCGCAAGTACAGCGAAAGTCAACTCGCATCGATGAGCTCCAAAACACCGCCTGCTTCCCCTCACAGGGTCAATGAGGTCAGGATGATTGACATAATCCCAGGCCAGAACACCCACATGCCAGCAGAAAGGGTTTCACCTGTTCGGAGGTCTTACCGTAAGGACAGTAATGGAGCCATGGAGGTGAACAGCAGGGTGAGAGGGAACATGGCCTCCCCTGTTTTTGCGGACCTTCCAGCCGGTCATGGAGATAAGCCGTTTCAAGGGCATGTAGGAGCAGGAGATCCGCAGAGTGAAAGAATAAAGGCCATGGAGCAGCAGATTGCCAGTCTTACTGGACTCGTTCAACACGCTCTTATGAAAGGGCCAAACACAAGTGCTAAAGAGGTTTCCAGTGAAAAAACAGTAAACATGGGACCCCCAGCACAGAACGGTGGCATGTGTGTTGTAACATCATCTAAGGAGCCAGCTGTGCAGACAGACAgttcttcagctcagtttcagaCCCCAGTCAAAGACCCAGCTTTAAGCTCAATCCTCTCCACCTTCAGGAGAAACGTCTCTGATCTCAGACTGCAGCTTCACCAGCTCAAACAGATGCAGCTACAAAACCAAGAATCAATAAGGCTGATGATGCAACAGGCAGAGCAGGAGATCTCGGAGAGGGTTTCAGACACTGTGCTGCACCTCGAGGACCCTGTTCATAGACAGAGAGTCCAGGTGGATGAAGAAAGACATCACTATCTCGGCATGGAGGAAAAAGTCCTTCTGCAGCTCGGAGAGCTGGAGAACTATGTGGAAATGCTGAAGAAAGAGTCCAGCTCTGCTATGAGTCAGCGACCGGTCACTCTGAAGGATGTGGAAGAAGGGGCCGTCAACTTGCGCAAAGTAGGAGAGGCTCTGGCCACACTCAAAGGAGAGTTCCCAGCCCTGCAGTTGAAAATGCGTGCTGTGTTGAGGGTGGAGGTAGAGGCGGTTCGTTTCCTGAAGGAGGAGCCTCACAAAATGGACAACATGCTGAAAAGAGTCAAAGCTCTGACTGACACTCTTAGTAGACTAAGAAGATATGCCACAGAGAGCCACAACCATACTTCTGACCAATTCCAAGTGAAGGCATTGACTGCTGATTCAGTGGAAGAGCACAGGTCTCCAAAACCTGTTCGTGAGTCCCCTACCCCACAACCGAGATCACCTGCCAAAGTCATCAACACAGAACCTGTGCCCTCTTCTCCAGTCACAGTCCACCGTGTTCAAACAGTTCCCTCCAATGCTCACCACCCCAGTCCCCCCCT

Function

GO:

id name namespace
GO:0048706 embryonic skeletal system development biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-185 Predicted to act upstream of or within embryonic skeletal system development. Predicted to be active in cytoplasm. Orthologous to human KIAA1217 (KIAA1217).

Ensembl:

ensembl_id ENSDART00000131376

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00031013 lncRNA upstream 115421 29712210 ~ 29727457 (+) True XLOC_015511
TCONS_00033552 lncRNA upstream 1419391 28393943 ~ 28423487 (+) True XLOC_015503
TCONS_00033267 lncRNA upstream 1492431 28245460 ~ 28350447 (+) True XLOC_015502
TCONS_00033266 lncRNA upstream 1494557 28245460 ~ 28348321 (+) False XLOC_015502
TCONS_00033265 lncRNA upstream 1648270 28194138 ~ 28194608 (+) True XLOC_015501
TCONS_00033553 lncRNA downstream 189601 30072679 ~ 30089989 (+) True XLOC_015516
TCONS_00031031 lncRNA downstream 243336 30126414 ~ 30126936 (+) True XLOC_015518
TCONS_00033268 lncRNA downstream 314292 30197370 ~ 30197741 (+) True XLOC_015521
TCONS_00031040 lncRNA downstream 394256 30277334 ~ 30280504 (+) True XLOC_015525
TCONS_00033554 lncRNA downstream 446327 30329405 ~ 30334513 (+) True XLOC_015527
TCONS_00031012 mRNA upstream 131117 29710857 ~ 29711761 (+) True XLOC_015510
TCONS_00031010 mRNA upstream 150053 29491314 ~ 29692825 (+) False XLOC_015509
TCONS_00031011 mRNA upstream 150059 29610114 ~ 29692819 (+) True XLOC_015509
TCONS_00031009 mRNA upstream 490200 29257975 ~ 29352678 (+) True XLOC_015508
TCONS_00031008 mRNA upstream 584577 29257942 ~ 29258301 (+) False XLOC_015508
TCONS_00031017 mRNA downstream 1285 29884363 ~ 29888635 (+) True XLOC_015512
TCONS_00031018 mRNA downstream 42483 29925561 ~ 29940519 (+) False XLOC_015513
TCONS_00031019 mRNA downstream 42599 29925677 ~ 29936058 (+) False XLOC_015513
TCONS_00031020 mRNA downstream 42599 29925677 ~ 29938980 (+) False XLOC_015513
TCONS_00031021 mRNA downstream 42601 29925679 ~ 29938980 (+) True XLOC_015513
TCONS_00030997 other upstream 1984044 27857688 ~ 27858834 (+) True XLOC_015497
TCONS_00030985 other upstream 2441961 27394840 ~ 27400917 (+) False XLOC_015492
TCONS_00030980 other upstream 2518697 27321014 ~ 27324181 (+) True XLOC_015489
TCONS_00030976 other upstream 2832533 27000542 ~ 27010345 (+) True XLOC_015486
TCONS_00030971 other upstream 3170031 26667680 ~ 26672847 (+) True XLOC_015483
TCONS_00031038 other downstream 386228 30269306 ~ 30270163 (+) True XLOC_015523
TCONS_00031039 other downstream 393139 30276217 ~ 30277062 (+) True XLOC_015524
TCONS_00031062 other downstream 903705 30786783 ~ 30832975 (+) False XLOC_015538
TCONS_00031070 other downstream 1033110 30916188 ~ 30921476 (+) False XLOC_015542
TCONS_00031072 other downstream 1033122 30916200 ~ 30926304 (+) False XLOC_015542

Expression Profile

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