Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU443407 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G390610 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 32318155 ~ 32318369 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU443242 | lncRNA | upstream | 4793 | 32313137 ~ 32313362 (+) | True | G390450 |
| TU443238 | lncRNA | upstream | 13326 | 32304606 ~ 32304829 (+) | True | G390446 |
| TU443186 | lncRNA | upstream | 94058 | 32223748 ~ 32224097 (+) | True | G390396 |
| TU443184 | lncRNA | upstream | 95720 | 32222227 ~ 32222435 (+) | True | G390394 |
| TU443179 | lncRNA | upstream | 102796 | 32214442 ~ 32215359 (+) | True | G390389 |
| TU443434 | lncRNA | downstream | 15166 | 32333535 ~ 32334298 (+) | False | LOC110523612 |
| TU443435 | lncRNA | downstream | 16239 | 32334608 ~ 32336514 (+) | True | LOC110523612 |
| TU443466 | lncRNA | downstream | 84457 | 32402826 ~ 32403113 (+) | True | G390649 |
| TU443520 | lncRNA | downstream | 218044 | 32536413 ~ 32536927 (+) | True | G390700 |
| TU443554 | lncRNA | downstream | 288786 | 32607155 ~ 32623203 (+) | True | LOC110523621 |
| XM_021602468.2 | mRNA | upstream | 47373 | 32257928 ~ 32270782 (+) | False | lhx3 |
| XM_021602467.2 | mRNA | upstream | 47373 | 32260648 ~ 32270782 (+) | False | lhx3 |
| XM_021602466.2 | mRNA | upstream | 47373 | 32260650 ~ 32270782 (+) | True | lhx3 |
| XR_002473470.2 | mRNA | upstream | 157738 | 32152908 ~ 32160417 (+) | False | LOC110523608 |
| XM_036977274.1 | mRNA | upstream | 1345812 | 30966139 ~ 30972343 (+) | False | LOC110522913 |
| XM_036977283.1 | mRNA | downstream | 15133 | 32333502 ~ 32336445 (+) | False | LOC110523612 |
| XM_036977284.1 | mRNA | downstream | 22507 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977285.1 | mRNA | downstream | 22507 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977287.1 | mRNA | downstream | 22507 | 32340876 ~ 32390222 (+) | False | LOC110523614 |
| XM_036977286.1 | mRNA | downstream | 49269 | 32367638 ~ 32390222 (+) | True | LOC110523614 |
| TU443183 | other | upstream | 97622 | 32220181 ~ 32220533 (+) | True | G390393 |
| TU442960 | other | upstream | 357410 | 31960355 ~ 31960745 (+) | True | G390184 |
| TU440680 | other | upstream | 2030331 | 30286951 ~ 30287824 (+) | True | G388019 |
| TU440079 | other | upstream | 2420021 | 29896986 ~ 29898134 (+) | True | G387516 |
| TU439971 | other | upstream | 2571961 | 29741800 ~ 29746194 (+) | True | tbx5a |
| TU444420 | other | downstream | 840457 | 33158826 ~ 33162980 (+) | True | G391513 |
| TU444741 | other | downstream | 1042588 | 33360957 ~ 33361341 (+) | True | G391805 |
| TU445804 | other | downstream | 1829105 | 34147474 ~ 34148701 (+) | False | G392776 |
| TU448046 | other | downstream | 3586743 | 35905112 ~ 35905781 (+) | True | G394882 |
| TU448080 | other | downstream | 3648568 | 35966937 ~ 36004829 (+) | True | G394910 |
