Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU480215 |
| length | 301 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G423858 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 61619835 ~ 61620135 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU480214 | lncRNA | upstream | 771 | 61618490 ~ 61619064 (+) | True | G423857 |
| TU480213 | lncRNA | upstream | 6860 | 61612695 ~ 61612975 (+) | True | G423856 |
| TU480204 | lncRNA | upstream | 12399 | 61606667 ~ 61607436 (+) | True | G423847 |
| TU480207 | lncRNA | upstream | 22388 | 61597033 ~ 61597447 (+) | True | G423850 |
| TU480153 | lncRNA | upstream | 89720 | 61529901 ~ 61530115 (+) | True | G423796 |
| TU480216 | lncRNA | downstream | 763 | 61620898 ~ 61621377 (+) | True | G423859 |
| TU480228 | lncRNA | downstream | 14209 | 61634344 ~ 61634631 (+) | True | G423871 |
| TU480232 | lncRNA | downstream | 18187 | 61638322 ~ 61638542 (+) | True | G423875 |
| TU480238 | lncRNA | downstream | 24537 | 61644672 ~ 61644981 (+) | True | G423881 |
| TU480231 | lncRNA | downstream | 35851 | 61655986 ~ 61656390 (+) | True | G423874 |
| XM_021603719.2 | mRNA | upstream | 20503 | 61590603 ~ 61599332 (+) | True | nr2c2ap |
| XM_036978014.1 | mRNA | upstream | 334169 | 61267215 ~ 61285666 (+) | True | hapln4 |
| XM_021603715.2 | mRNA | upstream | 354629 | 61248572 ~ 61265206 (+) | True | tm6sf2 |
| XM_036978012.1 | mRNA | upstream | 538828 | 61077504 ~ 61081007 (+) | True | LOC118964633 |
| XM_021603693.2 | mRNA | upstream | 677453 | 60939330 ~ 60942382 (+) | True | LOC110524234 |
| XM_021603721.2 | mRNA | downstream | 16969 | 61637104 ~ 61655108 (+) | False | LOC110524248 |
| XM_021603722.2 | mRNA | downstream | 16969 | 61637104 ~ 61655108 (+) | False | LOC110524248 |
| XR_005051827.1 | mRNA | downstream | 16969 | 61637104 ~ 61655195 (+) | True | LOC110524248 |
| XM_021603725.2 | mRNA | downstream | 166312 | 61786447 ~ 61793643 (+) | False | LOC110524251 |
| XM_021603726.2 | mRNA | downstream | 166312 | 61786447 ~ 61793643 (+) | False | LOC110524251 |
| TU478964 | other | upstream | 923930 | 60694257 ~ 60695905 (+) | True | LOC110524226 |
| TU476694 | other | upstream | 2675618 | 58942728 ~ 58944217 (+) | True | G420634 |
| TU476101 | other | upstream | 3203059 | 58413123 ~ 58416776 (+) | False | G420117 |
| TU475377 | other | upstream | 3720187 | 57884380 ~ 57899648 (+) | True | G419452 |
| TU475029 | other | upstream | 4252498 | 57365364 ~ 57367337 (+) | True | LOC110524119 |
| TU480287 | other | downstream | 101402 | 61721537 ~ 61722024 (+) | True | G423922 |
| TU480458 | other | downstream | 485388 | 62105523 ~ 62105872 (+) | True | G424079 |
| TU480579 | other | downstream | 663017 | 62283152 ~ 62306937 (+) | False | LOC110524265 |
| TU481721 | other | downstream | 1424955 | 63045090 ~ 63051530 (+) | True | G425224 |
| TU482675 | other | downstream | 2056279 | 63676414 ~ 63684239 (+) | True | nfil3-4 |
