Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU585116 |
| length | 503 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G515839 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 48957890 ~ 48958392 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU585113 | lncRNA | upstream | 2469 | 48955109 ~ 48955421 (+) | True | G515836 |
| TU585098 | lncRNA | upstream | 16107 | 48940586 ~ 48941783 (+) | True | G515821 |
| TU584691 | lncRNA | upstream | 57056 | 48899401 ~ 48900834 (+) | True | G515442 |
| TU584710 | lncRNA | upstream | 58589 | 48899096 ~ 48899301 (+) | True | G515460 |
| TU584697 | lncRNA | upstream | 61120 | 48895677 ~ 48896770 (+) | True | G515447 |
| TU585102 | lncRNA | downstream | 75431 | 49033823 ~ 49037542 (+) | True | LOC110526072 |
| TU585221 | lncRNA | downstream | 149954 | 49108346 ~ 49108615 (+) | True | G515932 |
| TU585177 | lncRNA | downstream | 203402 | 49161794 ~ 49162460 (+) | True | G515897 |
| TU585285 | lncRNA | downstream | 270777 | 49229169 ~ 49230070 (+) | True | G515985 |
| TU585286 | lncRNA | downstream | 274119 | 49232511 ~ 49232995 (+) | True | G515986 |
| XM_036980322.1 | mRNA | upstream | 429132 | 48419773 ~ 48528758 (+) | False | cntrl |
| XM_036980324.1 | mRNA | upstream | 429132 | 48419773 ~ 48528758 (+) | False | cntrl |
| XM_036980323.1 | mRNA | upstream | 429132 | 48419825 ~ 48528758 (+) | True | cntrl |
| XM_036980311.1 | mRNA | upstream | 564883 | 48387256 ~ 48393007 (+) | False | LOC110526080 |
| XM_021606674.2 | mRNA | downstream | 5167 | 48963559 ~ 49034090 (+) | False | LOC110526072 |
| XM_021606672.2 | mRNA | downstream | 104058 | 49062450 ~ 49063259 (+) | True | cmlc1 |
| XM_021606671.2 | mRNA | downstream | 118265 | 49076657 ~ 49134305 (+) | True | qsox2 |
| XM_021606668.2 | mRNA | downstream | 187735 | 49146127 ~ 49156002 (+) | True | LOC110526069 |
| XM_021604927.2 | mRNA | downstream | 224899 | 49183291 ~ 49187334 (+) | False | edf1 |
| TU585107 | other | upstream | 3599 | 48948617 ~ 48954291 (+) | False | LOC110526072 |
| TU584412 | other | upstream | 370002 | 48551619 ~ 48587888 (+) | False | G515189 |
| TU584269 | other | upstream | 1005636 | 47950006 ~ 47952254 (+) | True | G515069 |
| TU583904 | other | upstream | 1441180 | 47513786 ~ 47516710 (+) | True | LOC118964881 |
| TU583807 | other | upstream | 1637840 | 47306438 ~ 47320050 (+) | True | G514665 |
| TU585255 | other | downstream | 225481 | 49183873 ~ 49187323 (+) | True | edf1 |
| TU585185 | other | downstream | 275187 | 49233579 ~ 49246453 (+) | False | LOC110526066 |
| TU585313 | other | downstream | 346733 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU585370 | other | downstream | 428122 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585910 | other | downstream | 790796 | 49749188 ~ 49751749 (+) | True | barhl1a |
