Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU588428 |
| length | 560 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G518795 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 51846313 ~ 51846872 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU588432 | lncRNA | upstream | 389 | 51845646 ~ 51845924 (+) | True | G518799 |
| TU588430 | lncRNA | upstream | 821 | 51845201 ~ 51845492 (+) | True | G518797 |
| TU588401 | lncRNA | upstream | 107940 | 51735760 ~ 51738373 (+) | True | G518773 |
| TU588057 | lncRNA | upstream | 157777 | 51688140 ~ 51688536 (+) | True | G518452 |
| TU588039 | lncRNA | upstream | 183025 | 51658333 ~ 51663288 (+) | True | G518435 |
| TU588487 | lncRNA | downstream | 26169 | 51873041 ~ 51873363 (+) | True | G518848 |
| TU588769 | lncRNA | downstream | 176486 | 52023358 ~ 52023625 (+) | True | G519109 |
| TU588770 | lncRNA | downstream | 176876 | 52023748 ~ 52024087 (+) | True | G519110 |
| TU588778 | lncRNA | downstream | 184289 | 52031161 ~ 52031392 (+) | True | G519118 |
| TU588975 | lncRNA | downstream | 304153 | 52151025 ~ 52151235 (+) | True | G519306 |
| XR_005052160.1 | mRNA | upstream | 128082 | 51712790 ~ 51718231 (+) | False | LOC118964909 |
| XR_005052161.1 | mRNA | upstream | 128082 | 51712790 ~ 51718231 (+) | True | LOC118964909 |
| XM_021606776.2 | mRNA | upstream | 621049 | 51159434 ~ 51225264 (+) | False | LOC110526137 |
| XM_036980406.1 | mRNA | upstream | 621049 | 51159436 ~ 51225264 (+) | True | LOC110526137 |
| XM_036980404.1 | mRNA | upstream | 718169 | 51116884 ~ 51128144 (+) | True | znf608 |
| XM_021606787.2 | mRNA | downstream | 36411 | 51883283 ~ 52006875 (+) | False | homer1b |
| XM_021606786.2 | mRNA | downstream | 85900 | 51932772 ~ 52006875 (+) | True | homer1b |
| XM_021568351.2 | mRNA | downstream | 430822 | 52277694 ~ 52279409 (+) | False | LOC110493840 |
| XM_021606788.2 | mRNA | downstream | 538270 | 52385142 ~ 52390468 (+) | False | otpb |
| XM_021606790.2 | mRNA | downstream | 538270 | 52385142 ~ 52390468 (+) | True | otpb |
| TU586543 | other | upstream | 924216 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU586434 | other | upstream | 1111077 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU585910 | other | upstream | 2094564 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 2459101 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 2539173 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU589106 | other | downstream | 431621 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 805068 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 2079070 | 53925942 ~ 53955130 (+) | True | G521552 |
| TU591700 | other | downstream | 2423053 | 54269925 ~ 54270259 (+) | True | G521914 |
| TU592296 | other | downstream | 3032827 | 54879699 ~ 54940873 (+) | False | LOC110526161 |
