Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU589058 |
| length | 322 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G519388 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 52216987 ~ 52217308 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU589049 | lncRNA | upstream | 7997 | 52207796 ~ 52208990 (+) | True | G519379 |
| TU589046 | lncRNA | upstream | 10667 | 52206117 ~ 52206320 (+) | True | G519376 |
| TU589044 | lncRNA | upstream | 10983 | 52205779 ~ 52206004 (+) | True | G519374 |
| TU588975 | lncRNA | upstream | 65752 | 52151025 ~ 52151235 (+) | True | G519306 |
| TU588778 | lncRNA | upstream | 185595 | 52031161 ~ 52031392 (+) | True | G519118 |
| TU589236 | lncRNA | downstream | 246741 | 52464049 ~ 52466190 (+) | True | G519564 |
| TU589274 | lncRNA | downstream | 431049 | 52648357 ~ 52649692 (+) | True | G519602 |
| TU589347 | lncRNA | downstream | 438896 | 52656204 ~ 52656459 (+) | True | G519675 |
| TU589358 | lncRNA | downstream | 453117 | 52670425 ~ 52674545 (+) | False | G519685 |
| TU589359 | lncRNA | downstream | 453117 | 52670425 ~ 52674545 (+) | True | G519685 |
| XM_021606787.2 | mRNA | upstream | 210112 | 51883283 ~ 52006875 (+) | False | homer1b |
| XM_021606786.2 | mRNA | upstream | 210112 | 51932772 ~ 52006875 (+) | True | homer1b |
| XR_005052160.1 | mRNA | upstream | 498756 | 51712790 ~ 51718231 (+) | False | LOC118964909 |
| XR_005052161.1 | mRNA | upstream | 498756 | 51712790 ~ 51718231 (+) | True | LOC118964909 |
| XM_036980406.1 | mRNA | upstream | 991723 | 51159436 ~ 51225264 (+) | True | LOC110526137 |
| XM_021568351.2 | mRNA | downstream | 60386 | 52277694 ~ 52279409 (+) | False | LOC110493840 |
| XM_021606788.2 | mRNA | downstream | 167834 | 52385142 ~ 52390468 (+) | False | otpb |
| XM_021606790.2 | mRNA | downstream | 167834 | 52385142 ~ 52390468 (+) | True | otpb |
| XM_021606791.2 | mRNA | downstream | 307048 | 52524356 ~ 52645645 (+) | False | mapk8ip1b |
| XM_021606793.2 | mRNA | downstream | 307050 | 52524358 ~ 52645645 (+) | True | mapk8ip1b |
| TU586543 | other | upstream | 1294890 | 50911828 ~ 50922097 (+) | True | LOC110526128 |
| TU586434 | other | upstream | 1481751 | 50720401 ~ 50735236 (+) | True | LOC118964907 |
| TU585910 | other | upstream | 2465238 | 49749188 ~ 49751749 (+) | True | barhl1a |
| TU585370 | other | upstream | 2829775 | 49386514 ~ 49387212 (+) | False | LOC118964898 |
| TU585313 | other | upstream | 2909847 | 49305125 ~ 49307140 (+) | True | G516011 |
| TU589106 | other | downstream | 61185 | 52278493 ~ 52278998 (+) | True | LOC110493840 |
| TU589275 | other | downstream | 434632 | 52651940 ~ 52655297 (+) | True | G519603 |
| TU591331 | other | downstream | 1708634 | 53925942 ~ 53955130 (+) | True | G521552 |
| TU591700 | other | downstream | 2052617 | 54269925 ~ 54270259 (+) | True | G521914 |
| TU592296 | other | downstream | 2662391 | 54879699 ~ 54940873 (+) | False | LOC110526161 |
