Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU594293 |
| length | 400 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G524303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 56584276 ~ 56589481 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU594173 | lncRNA | upstream | 259106 | 56324937 ~ 56325170 (+) | True | G524199 |
| TU594074 | lncRNA | upstream | 302303 | 56278248 ~ 56281973 (+) | True | G524139 |
| TU594032 | lncRNA | upstream | 354624 | 56208278 ~ 56229652 (+) | True | LOC110526177 |
| TU594000 | lncRNA | upstream | 442070 | 56140696 ~ 56142206 (+) | True | G524074 |
| TU593999 | lncRNA | upstream | 443798 | 56139929 ~ 56140478 (+) | True | G524073 |
| TU594362 | lncRNA | downstream | 87628 | 56677109 ~ 56756337 (+) | True | G524371 |
| TU594512 | lncRNA | downstream | 299068 | 56888549 ~ 56889643 (+) | True | G524519 |
| TU594514 | lncRNA | downstream | 302905 | 56892386 ~ 56892635 (+) | True | G524521 |
| TU594462 | lncRNA | downstream | 303764 | 56893245 ~ 56895396 (+) | True | G524469 |
| TU594466 | lncRNA | downstream | 309695 | 56899176 ~ 56899420 (+) | True | G524473 |
| XM_021606897.2 | mRNA | upstream | 21321 | 56553850 ~ 56562955 (+) | False | LOC110526184 |
| XM_036980495.1 | mRNA | upstream | 21321 | 56553862 ~ 56562955 (+) | True | LOC110526184 |
| XM_036980467.1 | mRNA | upstream | 138411 | 56362031 ~ 56445865 (+) | False | LOC110526181 |
| XM_036980470.1 | mRNA | upstream | 138411 | 56362053 ~ 56445865 (+) | False | LOC110526181 |
| XM_036980478.1 | mRNA | upstream | 138411 | 56362053 ~ 56445865 (+) | False | LOC110526181 |
| XM_021606939.2 | mRNA | downstream | 356873 | 56946354 ~ 56951411 (+) | False | ptpmt1 |
| XM_021606938.2 | mRNA | downstream | 358075 | 56947556 ~ 56951411 (+) | True | ptpmt1 |
| XM_021606942.2 | mRNA | downstream | 364653 | 56954134 ~ 56960155 (+) | True | ndufs3 |
| XM_036980546.1 | mRNA | downstream | 499266 | 57088747 ~ 57196089 (+) | False | LOC110526195 |
| XM_036980547.1 | mRNA | downstream | 505331 | 57094812 ~ 57181107 (+) | False | LOC110526195 |
| TU593913 | other | upstream | 463542 | 56110279 ~ 56120734 (+) | True | LOC110526175 |
| TU593827 | other | upstream | 668330 | 55914343 ~ 55915946 (+) | True | LOC110526169 |
| TU593613 | other | upstream | 1017777 | 55563748 ~ 55566499 (+) | False | LOC110526167 |
| TU593407 | other | upstream | 1099669 | 55484249 ~ 55484607 (+) | True | G523529 |
| TU592297 | other | upstream | 1643403 | 54920472 ~ 54940873 (+) | True | LOC110526161 |
| TU595721 | other | downstream | 986603 | 57576084 ~ 57581070 (+) | True | G525645 |
| TU595951 | other | downstream | 1014627 | 57604108 ~ 57606367 (+) | True | G525861 |
| TU595733 | other | downstream | 1032367 | 57621848 ~ 57627619 (+) | True | fbxo3 |
| TU595717 | other | downstream | 1049993 | 57639474 ~ 57642482 (+) | True | LOC110526214 |
| TU596007 | other | downstream | 1113977 | 57703458 ~ 57710340 (+) | True | G525912 |
