RNA id: TCONS_00035516


Basic Information

Item Value
RNA id TCONS_00035516
length 99
RNA type miRNA
GC content 0.40
exon number 1
gene id XLOC_018021
representative True

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 19544648 ~ 19544746 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAATGTTGCCTCTTGTGAAGACATGCTTCCTTATATGCCCATATTAATGCTCAAGTTATGGAATGTAAGGAAGTGTGTGGTTTCAGGGGGAAATTTGTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000117540

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00036818 lncRNA downstream 18 19543143 ~ 19544630 (-) False XLOC_018020
TCONS_00035513 lncRNA downstream 12109 19525350 ~ 19532539 (-) True XLOC_018019
TCONS_00035511 lncRNA downstream 22765 19519432 ~ 19521883 (-) False XLOC_018019
TCONS_00035505 lncRNA downstream 159571 19382427 ~ 19385077 (-) True XLOC_018017
TCONS_00035500 lncRNA downstream 370525 19169932 ~ 19174123 (-) True XLOC_018014
TCONS_00036822 lncRNA upstream 191028 19735774 ~ 19789010 (-) True XLOC_018023
TCONS_00035529 lncRNA upstream 774375 20319121 ~ 20324703 (-) True XLOC_018029
TCONS_00035532 lncRNA upstream 797002 20341748 ~ 20355448 (-) True XLOC_018030
TCONS_00035537 lncRNA upstream 883582 20428328 ~ 20582383 (-) False XLOC_018032
TCONS_00036823 lncRNA upstream 943070 20487816 ~ 20582501 (-) True XLOC_018032
TCONS_00035508 mRNA downstream 11991 19494273 ~ 19532657 (-) False XLOC_018019
TCONS_00035509 mRNA downstream 12048 19512622 ~ 19532600 (-) False XLOC_018019
TCONS_00035510 mRNA downstream 12117 19516654 ~ 19532531 (-) False XLOC_018019
TCONS_00035512 mRNA downstream 13897 19521313 ~ 19530751 (-) False XLOC_018019
TCONS_00035506 mRNA downstream 32948 19436187 ~ 19511700 (-) False XLOC_018018
TCONS_00035517 mRNA upstream 35089 19579835 ~ 19590378 (-) True XLOC_018022
TCONS_00035519 mRNA upstream 282633 19827379 ~ 19864131 (-) False XLOC_018025
TCONS_00035520 mRNA upstream 282634 19827380 ~ 19858936 (-) False XLOC_018025
TCONS_00035522 mRNA upstream 420108 19964854 ~ 20182871 (-) False XLOC_018026
TCONS_00035523 mRNA upstream 548477 20093223 ~ 20111934 (-) True XLOC_018026
TCONS_00035515 other downstream 1186 19543379 ~ 19543462 (-) True XLOC_018020
TCONS_00035494 other downstream 768155 18774129 ~ 18776493 (-) False XLOC_018010
TCONS_00035486 other downstream 1162296 18354409 ~ 18382352 (-) False XLOC_018004
TCONS_00035481 other downstream 1760080 17784447 ~ 17784568 (-) True XLOC_017999
TCONS_00035480 other downstream 1901725 17642809 ~ 17642923 (-) True XLOC_017998
TCONS_00035518 other upstream 228614 19773360 ~ 19773475 (-) True XLOC_018024
TCONS_00035521 other upstream 306997 19851743 ~ 19864103 (-) True XLOC_018025
TCONS_00035528 other upstream 774077 20318823 ~ 20324569 (-) False XLOC_018029
TCONS_00035531 other upstream 783135 20327881 ~ 20331768 (-) False XLOC_018030
TCONS_00035544 other upstream 1272483 20817229 ~ 20821789 (-) False XLOC_018037

Expression Profile

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