RNA id: TCONS_00035518



Basic Information


Item Value
RNA id TCONS_00035518
length 116
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_018024
representative True

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 19773360 ~ 19773475 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCTGGGAGCTatagctctctgcagctctcatATAGTtgcccactgaagccaagcaaGAAGGGCCGAGTCAGTAACTGGATGggggaccacatgggaaagctaggttgcttcTGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000177299

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00036821 lncRNA downstream 226772 19543143 ~ 19546588 (-) False XLOC_018020
TCONS_00036820 lncRNA downstream 226793 19543143 ~ 19546567 (-) False XLOC_018020
TCONS_00036819 lncRNA downstream 227002 19543143 ~ 19546358 (-) False XLOC_018020
TCONS_00036818 lncRNA downstream 228730 19543143 ~ 19544630 (-) False XLOC_018020
TCONS_00035513 lncRNA downstream 240821 19525350 ~ 19532539 (-) True XLOC_018019
TCONS_00035529 lncRNA upstream 545646 20319121 ~ 20324703 (-) True XLOC_018029
TCONS_00035532 lncRNA upstream 568273 20341748 ~ 20355448 (-) True XLOC_018030
TCONS_00035537 lncRNA upstream 654853 20428328 ~ 20582383 (-) False XLOC_018032
TCONS_00036823 lncRNA upstream 714341 20487816 ~ 20582501 (-) True XLOC_018032
TCONS_00035541 lncRNA upstream 838417 20611892 ~ 20613584 (-) False XLOC_018035
TCONS_00035517 mRNA downstream 182982 19579835 ~ 19590378 (-) True XLOC_018022
TCONS_00035508 mRNA downstream 240703 19494273 ~ 19532657 (-) False XLOC_018019
TCONS_00035509 mRNA downstream 240760 19512622 ~ 19532600 (-) False XLOC_018019
TCONS_00035510 mRNA downstream 240829 19516654 ~ 19532531 (-) False XLOC_018019
TCONS_00035512 mRNA downstream 242609 19521313 ~ 19530751 (-) False XLOC_018019
TCONS_00035519 mRNA upstream 53904 19827379 ~ 19864131 (-) False XLOC_018025
TCONS_00035520 mRNA upstream 53905 19827380 ~ 19858936 (-) False XLOC_018025
TCONS_00035522 mRNA upstream 191379 19964854 ~ 20182871 (-) False XLOC_018026
TCONS_00035523 mRNA upstream 319748 20093223 ~ 20111934 (-) True XLOC_018026
TCONS_00035524 mRNA upstream 456111 20229586 ~ 20248408 (-) False XLOC_018027
TCONS_00035514 other downstream 227808 19543262 ~ 19545552 (-) False XLOC_018020
TCONS_00035516 other downstream 228614 19544648 ~ 19544746 (-) True XLOC_018021
TCONS_00035515 other downstream 229898 19543379 ~ 19543462 (-) True XLOC_018020
TCONS_00035494 other downstream 996867 18774129 ~ 18776493 (-) False XLOC_018010
TCONS_00035486 other downstream 1391008 18354409 ~ 18382352 (-) False XLOC_018004
TCONS_00035521 other upstream 78268 19851743 ~ 19864103 (-) True XLOC_018025
TCONS_00035528 other upstream 545348 20318823 ~ 20324569 (-) False XLOC_018029
TCONS_00035531 other upstream 554406 20327881 ~ 20331768 (-) False XLOC_018030
TCONS_00035544 other upstream 1043754 20817229 ~ 20821789 (-) False XLOC_018037
TCONS_00035546 other upstream 1043760 20817235 ~ 20821781 (-) False XLOC_018037