Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00035585 |
| length | 1332 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 4 |
| gene id | XLOC_018059 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 23160512 ~ 23171430 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006974 | cellular response to DNA damage stimulus | biological_process |
| GO:0048545 | response to steroid hormone | biological_process |
| GO:0035694 | mitochondrial protein catabolic process | biological_process |
| GO:0035695 | mitophagy by induced vacuole formation | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0005741 | mitochondrial outer membrane | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ko04131 | Membrane trafficking |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036834 | lncRNA | downstream | 1178 | 23157083 ~ 23159498 (-) | True | XLOC_018058 |
| TCONS_00036471 | lncRNA | downstream | 77212 | 23082802 ~ 23083464 (-) | True | XLOC_018056 |
| TCONS_00036833 | lncRNA | downstream | 77382 | 23081293 ~ 23083294 (-) | False | XLOC_018056 |
| TCONS_00036468 | lncRNA | downstream | 77388 | 23081293 ~ 23083288 (-) | False | XLOC_018056 |
| TCONS_00036472 | lncRNA | upstream | 5605 | 23169183 ~ 23171359 (-) | True | XLOC_018059 |
| TCONS_00036473 | lncRNA | upstream | 31210 | 23194788 ~ 23196658 (-) | True | XLOC_018060 |
| TCONS_00035600 | lncRNA | upstream | 316875 | 23480453 ~ 23488144 (-) | False | XLOC_018066 |
| TCONS_00036836 | lncRNA | upstream | 745016 | 23908594 ~ 23946098 (-) | True | XLOC_018071 |
| TCONS_00035610 | lncRNA | upstream | 901111 | 24064689 ~ 24122757 (-) | False | XLOC_018072 |
| TCONS_00035578 | mRNA | downstream | 119401 | 22869608 ~ 23041275 (-) | True | XLOC_018053 |
| TCONS_00035580 | mRNA | downstream | 134453 | 23022985 ~ 23026223 (-) | True | XLOC_018055 |
| TCONS_00035576 | mRNA | downstream | 361882 | 22739792 ~ 22798794 (-) | False | XLOC_018052 |
| TCONS_00035577 | mRNA | downstream | 382282 | 22756556 ~ 22778394 (-) | True | XLOC_018052 |
| TCONS_00035575 | mRNA | downstream | 676055 | 22483048 ~ 22484621 (-) | True | XLOC_018050 |
| TCONS_00035588 | mRNA | upstream | 40368 | 23203946 ~ 23226453 (-) | False | XLOC_018061 |
| TCONS_00035589 | mRNA | upstream | 42556 | 23206134 ~ 23219964 (-) | False | XLOC_018061 |
| TCONS_00035591 | mRNA | upstream | 82042 | 23245620 ~ 23253630 (-) | False | XLOC_018062 |
| TCONS_00035592 | mRNA | upstream | 82042 | 23245620 ~ 23254876 (-) | False | XLOC_018062 |
| TCONS_00035594 | mRNA | upstream | 260236 | 23423814 ~ 23426339 (-) | False | XLOC_018063 |
| TCONS_00035582 | other | downstream | 78486 | 23082069 ~ 23082190 (-) | False | XLOC_018056 |
| TCONS_00035581 | other | downstream | 78880 | 23081660 ~ 23081796 (-) | True | XLOC_018057 |
| TCONS_00035579 | other | downstream | 250364 | 22910198 ~ 22910312 (-) | True | XLOC_018054 |
| TCONS_00035566 | other | downstream | 1250542 | 21897971 ~ 21910134 (-) | True | XLOC_018042 |
| TCONS_00035565 | other | downstream | 1297772 | 21839504 ~ 21862904 (-) | False | XLOC_018042 |
| TCONS_00035590 | other | upstream | 60322 | 23223900 ~ 23226376 (-) | True | XLOC_018061 |
| TCONS_00035593 | other | upstream | 82061 | 23245639 ~ 23248639 (-) | True | XLOC_018062 |
| TCONS_00035595 | other | upstream | 260268 | 23423846 ~ 23425654 (-) | True | XLOC_018063 |
| TCONS_00035611 | other | upstream | 919561 | 24083139 ~ 24122757 (-) | True | XLOC_018072 |
| TCONS_00035616 | other | upstream | 989221 | 24152799 ~ 24172140 (-) | False | XLOC_018073 |
