RNA id: TU862950



Basic Information


Item Value
RNA id TU862950
length 367
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G759378
representative True

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 88378973 ~ 88379339 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGAAATATTGGACTCTGGGTATTCCATTTTGATTCCCAGTTACATTGTTTTTCAATTTTGCGCCAAATATAGATTGTGTTCGCAATAATAGGATCAAAGCTATCAAAGCATTGTTTGAGGGATGTATCAATGacgaccacctcttccagggcaataggatacaccatatttctctctatactcaACCAGAGGGCAGAAGAATCATGTCTAAACCAATTTAGGATGGGACGAAAAGCTAGTGTCTGGAAATACCATTTAAAGTTTGGTACAGATGGTCCACTTCCTGTTATTACTGAGGGATCGGAATATAGTATTTGAATCACATTAATGAAATTGGAGCCAAGTCCCATATGTTACAAAACCGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU862943 lncRNA downstream 4407 88374244 ~ 88374566 (-) True G759371
TU862934 lncRNA downstream 8187 88370002 ~ 88370786 (-) False G759364
TU862936 lncRNA downstream 8473 88370002 ~ 88370500 (-) True G759364
TU862909 lncRNA downstream 37613 88338494 ~ 88341360 (-) True G759349
TU862904 lncRNA downstream 44290 88333097 ~ 88334683 (-) True G759346
TU863006 lncRNA upstream 51659 88430998 ~ 88438817 (-) False G759421
TU863005 lncRNA upstream 51865 88431204 ~ 88440628 (-) False G759421
TU863011 lncRNA upstream 52702 88432041 ~ 88438241 (-) False G759422
TU863008 lncRNA upstream 53452 88432791 ~ 88438817 (-) False G759421
TU863012 lncRNA upstream 56840 88436179 ~ 88438241 (-) True G759422
XM_036986670.1 mRNA downstream 16667 88342455 ~ 88362306 (-) True LOC110509139
XM_036986663.1 mRNA downstream 47478 88085908 ~ 88331495 (-) False LOC110518901
XM_036986896.1 mRNA upstream 598 88379937 ~ 88570992 (-) True LOC110531049
XM_036986685.1 mRNA upstream 292126 88671465 ~ 88694158 (-) False LOC110530889
XM_036986684.1 mRNA upstream 292126 88671465 ~ 88710355 (-) False LOC110530889
XM_036986679.1 mRNA upstream 292126 88671465 ~ 88715571 (-) False LOC110530889
XM_036986680.1 mRNA upstream 292126 88671465 ~ 88715571 (-) False LOC110530889
TU862683 other downstream 436151 87940904 ~ 87942822 (-) True LOC110530858
TU860865 other downstream 2146781 86230374 ~ 86232192 (-) False G757788
TU860867 other downstream 2146781 86230374 ~ 86232192 (-) False G757788
TU860868 other downstream 2146781 86230374 ~ 86232192 (-) False G757788
TU860438 other downstream 2515086 85863011 ~ 85863887 (-) True G757422
TU863003 other upstream 51865 88431204 ~ 88443468 (-) False G759421
TU863742 other upstream 156301 88535640 ~ 88536047 (-) True G759982
TU863763 other upstream 284265 88663604 ~ 88665140 (-) False G759998
TU863860 other upstream 323652 88702991 ~ 88704054 (-) True G760051
TU863910 other upstream 448645 88827984 ~ 88830811 (-) False LOC110530888

Expression Profile