Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU937616 |
| length | 848 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 5 |
| gene id | fkb1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 58854845 ~ 58856718 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | biological_process |
| GO:0006457 | protein folding | biological_process |
| GO:0033017 | sarcoplasmic reticulum membrane | cellular_component |
| GO:0005528 | FK506 binding | molecular_function |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU937618 | lncRNA | upstream | 3392 | 58847445 ~ 58851453 (+) | True | G824598 |
| TU937610 | lncRNA | upstream | 54446 | 58797882 ~ 58800399 (+) | True | G824590 |
| TU937545 | lncRNA | upstream | 109311 | 58745293 ~ 58745534 (+) | True | G824549 |
| TU937519 | lncRNA | upstream | 176416 | 58678195 ~ 58678429 (+) | True | G824524 |
| TU937518 | lncRNA | upstream | 176865 | 58677693 ~ 58677980 (+) | True | G824523 |
| TU937636 | lncRNA | downstream | 3431 | 58860130 ~ 58861007 (+) | True | G824616 |
| TU937637 | lncRNA | downstream | 4428 | 58861127 ~ 58863014 (+) | True | G824617 |
| TU937638 | lncRNA | downstream | 6443 | 58863142 ~ 58863399 (+) | True | G824618 |
| TU937639 | lncRNA | downstream | 7221 | 58863920 ~ 58864507 (+) | True | G824619 |
| TU937666 | lncRNA | downstream | 37544 | 58894243 ~ 58902558 (+) | True | G824640 |
| LOC110531221 | mRNA | upstream | 11541 | 58822132 ~ 58843304 (+) | True | LOC110531221 |
| XM_021616455.2 | mRNA | upstream | 31792 | 58817004 ~ 58823053 (+) | False | LOC110532497 |
| XM_021616456.2 | mRNA | upstream | 31792 | 58818136 ~ 58823053 (+) | False | LOC110532497 |
| XM_036988515.1 | mRNA | upstream | 31792 | 58819046 ~ 58823053 (+) | True | LOC110532497 |
| XM_036988513.1 | mRNA | upstream | 40307 | 58763665 ~ 58814538 (+) | False | prickle3 |
| XM_021616463.2 | mRNA | downstream | 71320 | 58928019 ~ 58937708 (+) | True | LOC110532502 |
| XM_021616465.2 | mRNA | downstream | 81090 | 58937789 ~ 58947479 (+) | False | uckl1a |
| XM_036988522.1 | mRNA | downstream | 81223 | 58937922 ~ 58947479 (+) | False | uckl1a |
| XM_036988523.1 | mRNA | downstream | 81223 | 58937922 ~ 58947479 (+) | False | uckl1a |
| XM_021616464.2 | mRNA | downstream | 81692 | 58938391 ~ 58947479 (+) | True | uckl1a |
| TU937515 | other | upstream | 170335 | 58684149 ~ 58684510 (+) | True | LOC110531219 |
| TU937506 | other | upstream | 183594 | 58668154 ~ 58671251 (+) | False | LOC110532492 |
| TU936410 | other | upstream | 319202 | 58519219 ~ 58535643 (+) | True | G823580 |
| TU936293 | other | upstream | 464275 | 58388671 ~ 58390570 (+) | True | LOC110532478 |
| TU936255 | other | upstream | 604538 | 58247114 ~ 58250307 (+) | True | G823459 |
| TU937747 | other | downstream | 168501 | 59025200 ~ 59028143 (+) | True | ppdpfa |
| TU937803 | other | downstream | 301882 | 59158581 ~ 59160196 (+) | False | LOC118966079 |
| TU937938 | other | downstream | 520407 | 59377106 ~ 59382411 (+) | True | LOC110532530 |
| TU937994 | other | downstream | 557448 | 59414147 ~ 59415013 (+) | True | G824936 |
| TU938660 | other | downstream | 741330 | 59598029 ~ 59598970 (+) | True | G825484 |
