RNA id: XM_036936604.1


Basic Information

Item Value
RNA id XM_036936604.1
length 5909
RNA type mRNA
GC content 0.51
exon number 12
gene id tmem8b
representative False

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 86041742 ~ 86232638 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCACTTCGTAACAGACTACTTTACACGGACGCCTCGTAAGCTGAACGCGTTCCGGTCCTTCGCCAGCGTGGAGCTGTTCCACTTCAGTGTTCCTGAAGACACTGTGGTGGCTGTATGGAACCTCATCACCTTCAAGGAACAGGGAGGAACCTTCGGTGACAGCTGTCCCGACCGCAACGTCACAGTGTACTTCAGAGCAGGAGCCCCTCCCGTCATCAACCCCCTCCACACGCGATTCCCACAGGATACCATCGTCCCAGGGTCCTTTGCAGTCACTCTCACATGGACTCTACCAAACCGCACCACAGGGGTGTTCAATGTGACCTCACCCCTCCCCGGGGACTGGTTCCTGGCTGCACACCTGCCCAAGGATGAGGGAAAGATCTCTGTCAAGggtCTGTATGAGGAGTGTCAGTATCTCTTCCAGCCCCAGCTCATCGTTCAGAGGCTGATAGGGATCTCTGTTCTCTATCCTGGTTACTTCATAGAACAGATGGTTCCTGCCCACAACAGATCTGTGCTCTACAAAGTGTTCATCCCCAGTTACGTGTCCAGTGTAAAAGTCCAACTGGCTAACTGCAGCACACACCCCAGAGACCAACCATCCAGGGGACAGAcgcgagacagagacagtactGGAGACAGCTGTTCTGTTGTCTTAAAGATCCGAGCCAGGGCTCCTCCAGTCCACAACTCATCAGCTCTGGACTGCAGGGAGTGGTCACCGTGTGAGCTTGACACACCCCTTCCTGCCTGGGAACACTGGTACTATATCCTGGTGGAGCGTTACCTAAGCAACCAGGACGTATACTTCCGCATCGGTGTGCAGGTCACAGaTTGCTCCAAATCCAGCGCCTCTAAGGGTTCCCCCTCCAGCTCCTCTTCTGGCCCCAGCTCTAATCTCAACCTGCCGCAGTCCTTTGGCAGTGCTatgggcttctctctctctgagacgcTCCCCTCCACCCCTGCCGGCCTCCCGGGCCTCCCCAGCCACGCCCAGAACTCCTCCTCTTTGGACCCCGCTGGATCCCTTCTCTCCCCACAGGACAGTATAACCCATATGGCTCCCAGCTCCGACCCCCACAGGTGCTGGCCCATCCGGCCCACCCTGAGGAATGAGCTGGACACCTTCTCCGTCCACTTCTACATCTTCTTTGGTCCGAACATCTCTGTTCCTCCGGACAGGGCTGCTGTGTTCTCCATTAACCTCATGCCTGTCCTGGACAGTGGAGGAGTCCTGAATATGGAACTCAAACTCAACTTGTCTTCgttgagaggagagaacatcACGGTGTTTGGCTGTCTGAACCACGGCATGCCCCTGTCCCTGAAAGACAACTCCTCTGTCAAATGTGAATCAGattCCGTATCAGGCTTCCTGTTGTCAGTAAACTCCAGCTCCAACATCACTAAACTGAGGATCCCCTACCCCCAGACTGGCACCTGGTACCTCAGCCTGAGATCCCTCTGTGCCACCGAACATGGGTTTGAGCCATGTTCCAACATGACAGCGGAGGTGTACCTGCGCTCCTACCTGACCCCCTGCATCAATGACTGTGGGACCTACGGACAGTGCAAACTGCTACGCACTAACAACTATCTGTACGCTGCATGCGAGTGCAAAGCAGGCTGGGACGGCTGGGGCTGTACAGACCCCTCGGAGGCGTATTCCTATAGTTTCCAGCTCCTGTCCACCTTGCTGCTCTGTCTCAGTAACCTGATGTTCGTTCCTCCTGTGGTGATCGCTGTCCGTGGCCACTACCTTCTGGAGGCCTCTGTATACATCTTCACCATGTTCTTTTCTACTTTCTACCATGCGTGTGACCAGCCTGGTATCGTGGTGTTTTGTATCATGGAATACGATGTTCTCCAGTTCTGTGACTTTCTGGGTTCCCTCATGTCTGTCTGGGTCACCGTCATCTCTATGGCCCGGCTCAAGTCTATCATTAAACAGGTGCTGTATTTACTCGGGGCCATGACTCTCTCCATGGCTCTCCAGTTGGACCGTCACGGCCTGTGGAACCTCCTGGGACCGTCCCTCTTCGCCCTGGGCATCATGGCTGTAGCCTGGacGGTGCGTACAGTGCGACGGCGGCGATGTTACCCTCCGACCTGGAAGCGCTGGGCGTTCTTTCTGTTCCCGGGGACGATGATAGCGGTTTCAGCCGTGGCGCTCTATGCGTTCGTGGAGACAGAGGACAACTACTTCTACATACACTCTATCTGGCACATGCTGATCGCCGGCAGCGTGGGCTTCCTGCTCCCTCCCCGCGCCAAGCCCCGCACCAAGCTCACACCTCTGAAACGTCGGAGGGGGTGTGGCTACCAGCTGTGCGTCAACGAGCACGAGGAGATGGGATTGGTGGACCCGGTCCCTGCCATAGTTGCTATCAATAGTATTAGTATCAGCTGATACCTGAGATCACTAACTCTGACTGACTGTACCAGCTGAAGAGTGGTTCTAGCACCTACTGACTGACAGTACCAGCTAGACACGGGATCTAGCACCTATTGACTGACTGTACCAGCTGAGGAAAGGATCTAGcacctactgactgactgtaccaGATGGACACGGGATCTAGCACCTATTGACTGACTTTACCAGCTGGACACGGGATCTAGCACCTACGGACTGACTGTACCAGCAGGACACGGGATATAAcatctactgactgactgactgtaccgGCTGGAAGTAGGATATAGcacctactgactgactgactgtaccaGCTGGATGTGGGATCTAGcacctactgactgactgactgtaccaGCAGGACATGGGATATAAcatctactgactgactgactgtaccgGCTGGAAGTAGGATATAGcacctactgactgactgactgtaccaGCTGGATGTGGGATCTAGcacctactgactgactgactgtaccaGCTGGATGTGGGATCTAGCACCTACTGACTGACTTACTGTACCAGCTGGACATTGGATCTAGcacctactgactgactgtactaGCTGGACATGGGATATAAcatctactgactgactgactgactgtaccaGCTGGATGTGGGATATAACACCTACTAACTGACTGTACCAGCTGGACATGGGATATAGcacctactgactgactgactgtaccaGCTGGAGGCGGGATCTAGCagctactgactgactgtaccaGCTGGACTTGGGATATAACACCTACTGACTGACTCTTCCAACTGAGGATGGGATCTATCACGTACTGACTGAGTGTACCAGCCGAGGATGGGATCTAGCCCTAACTCTGACTGACTGTACCAGCTGAGGACAGGGTCTAGCACGTACTGACTGACTGTGCCAGCTGATTATATCAATGACTGACTGTACCAGGTGattaactcactgactgactgtactAGCTGattaactcactgactgactgtaccAGCTGATTAAATCACTTACTGACTGTACCAGCTGATTAAATCACTTACTGACTGTACCAGCTGATTACATAACTGACCGACTCTACCAGCTGGCACAGCGGTGGGATCTAACACCTACTAACTGTCTCACTGACGGACTTTCTGACCGACTGTCTGACTGAttagctggctgactggctaggcTGACTGGCtaggctgactggctggctgactggctgactgactggctggctgacttcctgactgattggctggctggctgactgactgactggctggctgactgactggctggctgactggctggctgactgattggctggctggctggctgactggctggctgactgtcctTCCATTGCCTTCTCTCCCCGGGGATTCAGACGGGAAAACAAAGCCAGAGAACTTGAACCAACTGTAATGTAACTAGTTAAAGCAGGCGACACacttgagtctgtctgtctgtctgtctgtctgtctgtctgttaaagtCATGATTATTCAATACCACCataattatattattctattgaTATTGTTGGGGTTGTGAACGTACAGTACAGTAAGAGACTATTGTTTGTGGATACTGTACTTTTTAAAGACGAAGCTGAGAACACTGCTGCTACCTGACGGTGACTGTAACATTAGGTCTGTACGGTGCCCATATTAGGACAGCGTCAGCAGGCGTTATTAGGTCCTGGTCAGACTGAGGATGTCCTAATACAGACACCATAGGTGTGTTATTTAATGAtggtctgcattccaaatggcaccttgttcCCTTTGTAGCAGTACTATTGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGCGTTGACCAGGGCCTACGGTGTTGACCAGGGCCTACGGTGTTGACCATGTCCTATGGCTGCTGGTGTTGACCAGGTCCTACGGCTGCTGGTGTTGACCAGGTACTACGGCTGCTGGTGTTGACCAGGTCCTACGGCTGCTGGTGTTGACCAGGTCCTACGGCTGCTGGTCAACATAGTGTACTCTATGGGGAACAGGAggcatttggaacacagcccCTATTGAAGACCTTTCTAGCTATGTTGATTCGTTCTGTTGTTTGTGCACGGAAATGGAATTAAATACAACAAGGGCacgtttttgttatttttcaacATAATCTATTTTGCACTGAGACACAAAAATGTgataatactgtacattttgtTTTTAGATGCGTGTATAAAGCCTTACCAGTGCCACATAGTTCAAATGTATACAATATTGTTGTACTGTGGAATGTTAATAGTCTTTTGGATTGCAATGTATCGCCTTTACACACAGTCTGCTGGTTGTCAACACTACAGGCCATAAAGGAGGGGCATCTGCTTGCCATAGATCTGTGGTAAGGCCATAGAGGGAAGCTGAATGCCATAGATCTGTGGTAAGGCCATAGAGGGAAGCTGCCTGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGCATGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGACTGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGACTGCCATAGATCTGTGGTAAGGCCATAGAGGGAAGCTGCCTGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGACTGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGCCTGCCATAGATCTGTAGTAAGGCCATAGAGGGAAGCTGCCTGCCATAGATCTGTAGTAAGGCCATAGAGCTATAAGCCACATACAGAGAACAGACAGTACAGGCCATAATATACAGAAGAGCAATTGAATGTTTGTAGCTACGTGAATGCCGTAGAGCTGTAGTAAGGCCATATAAAGGGGCAGGTGATTGTACATGTAGCTACAGTATGGCCATGAATGTTGCTACAGTTAGAGTTTAGGCCATAGAGTTACAGTAATGCTAGATGTGTTatattcattacagctacagcaGAGAGACAAGTTTGACCATACTTACAGAGAGAGGCAGCTGTATGCTACAGAAGGCCAACAGGTTTATACCAGAGATAGAGTATTGACCATAGTTACAGAGAGAGGCAGCTGTATGCTACAGAAGGCCAACAGGTTTATACCAGAGATAGAGTAGTGACCATACTTACAGAGAGAGGCAGCTGGATGCTACAGAAGGCCAACAGGTTTATACCAGAGATAGAGTATTGACCATAGTTACAGAGAGAGGCAGCTGGATGCTACAGAAGGCCAACAGGTTTATACCAGAGACATCACAATAAGACCTCAAACCTCCTGTTATTACAGTCAGGACCTGTTCCTCACCGGAACAGAGAATTCACTCTAAATAAATGTTTCTTTTTTCTGTACTCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1169286 lncRNA downstream 23479 86017968 ~ 86018263 (-) True G1027220
TU1169284 lncRNA downstream 24148 86017215 ~ 86017594 (-) True G1027218
TU1169279 lncRNA downstream 32471 86009034 ~ 86009271 (-) True G1027214
TU1169277 lncRNA downstream 35781 86005726 ~ 86005961 (-) True G1027212
TU1169272 lncRNA downstream 38754 86002755 ~ 86002988 (-) True G1027207
TU1169565 lncRNA upstream 1374 86234012 ~ 86234353 (-) True G1027448
TU1169568 lncRNA upstream 5128 86237766 ~ 86237965 (-) True G1027451
TU1169569 lncRNA upstream 6991 86239629 ~ 86239909 (-) True G1027452
TU1169570 lncRNA upstream 7340 86239978 ~ 86240367 (-) True G1027453
TU1169579 lncRNA upstream 19350 86251988 ~ 86252366 (-) True G1027462
XM_036936598.1 mRNA downstream 383001 85452185 ~ 85658741 (-) True dapk1
XM_036936596.1 mRNA downstream 383002 85452185 ~ 85658740 (-) False dapk1
XM_036936597.1 mRNA downstream 383008 85452185 ~ 85658734 (-) False dapk1
XR_005034781.1 mRNA downstream 519226 85520579 ~ 85522516 (-) True LOC118937430
XR_005034780.1 mRNA downstream 519238 85520579 ~ 85522504 (-) False LOC118937430
TU1168973 other downstream 427367 85613352 ~ 85614375 (-) True G1026978
TU1168443 other downstream 844242 85187326 ~ 85197500 (-) False G1026586
TU1167230 other downstream 2138703 83873900 ~ 83903039 (-) True ypel1
TU1167229 other downstream 2141266 83873900 ~ 83900476 (-) False ypel1
TU1167110 other downstream 2323134 83716077 ~ 83718608 (-) False G1025498

Expression Profile