RNA id: TCONS_00043637


Basic Information

Item Value
RNA id TCONS_00043637
length 120
RNA type rRNA
GC content 0.58
exon number 1
gene id XLOC_022077
representative True

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 1218382 ~ 1218501 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATTGGAGGACCAGctcgctctctgcaactctcacatggtcgcccactgaagctaagcagggctgcgcctggtcagtacctggatgggagaccacatggtaaagctgggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120806

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00044927 lncRNA downstream 39218 1177395 ~ 1179164 (-) True XLOC_022076
TCONS_00043635 lncRNA downstream 78322 1124514 ~ 1140060 (-) True XLOC_022074
TCONS_00043634 lncRNA downstream 94411 1118305 ~ 1123971 (-) True XLOC_022073
TCONS_00044926 lncRNA downstream 112245 1103195 ~ 1106137 (-) True XLOC_022072
TCONS_00044710 lncRNA downstream 139017 1077916 ~ 1079365 (-) True XLOC_022071
TCONS_00044928 lncRNA upstream 294808 1513309 ~ 1640307 (-) False XLOC_022079
TCONS_00044929 lncRNA upstream 418443 1636944 ~ 1640165 (-) False XLOC_022079
TCONS_00044930 lncRNA upstream 418443 1636944 ~ 1640234 (-) False XLOC_022079
TCONS_00044931 lncRNA upstream 418443 1636944 ~ 1640262 (-) False XLOC_022079
TCONS_00044932 lncRNA upstream 418443 1636944 ~ 1640304 (-) False XLOC_022079
TCONS_00043636 mRNA downstream 73957 1140306 ~ 1144425 (-) True XLOC_022075
TCONS_00043633 mRNA downstream 152947 1058116 ~ 1065435 (-) True XLOC_022070
TCONS_00043632 mRNA downstream 161574 1042624 ~ 1056808 (-) True XLOC_022069
TCONS_00043629 mRNA downstream 200777 980001 ~ 1017605 (-) False XLOC_022067
TCONS_00043630 mRNA downstream 200954 980261 ~ 1017428 (-) False XLOC_022067
TCONS_00043638 mRNA upstream 129305 1347806 ~ 1348933 (-) True XLOC_022078
TCONS_00043639 mRNA upstream 308207 1526708 ~ 1557195 (-) True XLOC_022080
TCONS_00043640 mRNA upstream 343430 1561931 ~ 1571682 (-) True XLOC_022081
TCONS_00043641 mRNA upstream 361793 1580294 ~ 1583193 (-) True XLOC_022082
TCONS_00043642 mRNA upstream 367786 1586287 ~ 1587955 (-) True XLOC_022083
TCONS_00043618 other downstream 597296 618553 ~ 621086 (-) True XLOC_022061
TCONS_00043611 other downstream 729185 481027 ~ 489197 (-) True XLOC_022056
TCONS_00043654 other upstream 1837480 3055981 ~ 3056096 (-) True XLOC_022096
TCONS_00043689 other upstream 3698404 4916905 ~ 4925625 (-) False XLOC_022113
TCONS_00043690 other upstream 3698454 4916955 ~ 4925623 (-) False XLOC_022113
TCONS_00043705 other upstream 3992520 5211021 ~ 5365184 (-) False XLOC_022119
TCONS_00043706 other upstream 4081778 5300279 ~ 5365345 (-) True XLOC_022119

Expression Profile

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